Table S3.
QTL and epistatic interactions detected for fitness and its components establishment, survival and fecundity in a seed transplant experiment in Italy and Sweden
| Fitness | Establishment | Survival | Fecundity | ||||||||||||||
| QTL | Chr | Position (95% Bayes) | LOD | Effect size | PVE | Position (95% Bayes) | LOD | Effect size | PVE | Position (95% Bayes) | LOD | Effect size | PVE | Position (95% Bayes) | LOD | Effect size | PVE |
| Italy | |||||||||||||||||
| Q7 | 4 | 44.3* (34.5–57.7) | 3.3 | −0.096 | 6.6 | 37.4 (20.7–56.6) | 4.1 | −0.008 | 7.2 | — | — | — | — | — | — | — | — |
| Q9 | 5 | 57.7 (49.9–59.6) | 3.8 | −0.097 | 7.5 | 57.7 (52.4–58.6) | 8.6 | −0.011 | 16.0 | — | — | — | — | — | — | — | — |
| Full model | 6.5 | 13.3 | 11.9 | 23.1 | — | — | — | — | — | — | — | — | |||||
| Sweden | |||||||||||||||||
| Q1 | 1 | 5.3* (0.0–8.8) | 4.2 | 0.101 | 6.0 | 1.4 (1.4–4.4) | 9.5 | 0.050 | 9.4 | — | — | — | — | — | — | — | — |
| Q2 | 1 | — | — | — | — | 66.8 (61.0–67.6) | 4.4 | 0.033 | 4.1 | — | — | — | — | — | — | — | — |
| Q3 | 2 | 49.58* (44.3–58.6) | 3.4 | 0.089 | 4.8 | 43.1 (39.8–46.9) | 1.3 | 0.017 | 1.2 | — | — | — | — | — | — | — | — |
| Q4 | 3 | 0.1 (0.0–41.4) | 4.5 | 0.104 | 6.4 | 8.2 (1.7–8.2) | 7.3 | 0.044 | 7.1 | 6.3* (3.5–11.2) | 2.3 | 0.079 | 4.2 | — | — | — | — |
| Q5 | 3 | — | — | — | — | 50.2 (43.8–57.1) | 1.0 | 0.015 | 0.9 | — | — | — | — | — | — | — | — |
| Q6 | 4 | 24.0* (22.4–24.3) | 4.2 | 0.102 | 6.0 | 25.3* (25.3–25.3) | 12.1 | 0.069 | 12.4 | 28.0 (25.3–32.1) | 2.1 | 0.072 | 3.8 | — | — | — | — |
| Q7 | 4 | — | — | — | — | 41.1* (33.4–42.3) | 6.5 | −0.049 | 6.3 | — | — | — | — | 34.5 (20.7–37.4) | 1.8 | 2.46 | 3.8 |
| Q8 | 5 | — | — | — | — | — | — | — | — | 1.4* (0.0–25.4) | 2.8 | 0.090 | 5.2 | — | — | — | — |
| Q9 | 5 | 58.6 (54.3–60.6) | 9.4 | 0.153 | 14.2 | 54.3* (54.3–54.3) | 14.8 | 0.064 | 15.6 | 57.7 (52.4–61.3) | 0.4 | 0.033 | 0.7 | — | — | — | — |
| Q6xQ9 | — | — | — | — | — | — | 0.1 | −0.006 | 0.1 | — | — | — | — | — | — | — | — |
| Q4xQ6 | — | — | — | — | — | — | — | — | — | — | 0.1 | 0.020 | 0.3 | — | — | — | — |
| Full model | 20.5 | 35.0 | 40.5 | 57.3 | 7.6 | 15.0 | 1.8 | 3.8 | |||||||||
The chromosome (chr), point estimate in cM with 95% Bayesian credible interval (95%Bayes), LOD score, effect size, and the percentage of variance explained (PVE) are given for each QTL detected. QTL were considered to be the same when their 95% Bayesian credible intervals were <15.2 cM and overlapped with each other. QTL with a credible interval >15.2 cM that overlapped with the point estimate of another QTL are placed under that QTL or under the QTL with the shortest distance between the point estimates if it overlapped with more than one QTL and are shown in italic type. A positive effect size indicates that the Swedish genotype is associated with a higher phenotypic value than is the Italian genotype.