Table 2.
Overiview and details used for phylogenetic analyses.
|
Dataset |
|||||
|---|---|---|---|---|---|
| P. citreonigrum clade | P. corylophilum clade | P. melinii clade | P. parvum clade | ||
| Length (bp) | 449 | 420 | 454 | 427 | |
| BenA dataset | Substitution model (BI) | K80+G | SYM+G | HKY+G | SYM+G |
| Substitution model (ML) | K2+I | K2+G | K2+G | K2+G | |
| Length (bp) | 495 | 504 | 490 | 530 | |
| CaM dataset | Substitution model (BI) | K80+I | SYM+I | GTR+G | GTR+I+G |
| Substitution model (ML) | K2+G | K2+G | K2+G | K2+G | |
| Length (bp) | 877 | 695 | 838 | 888 | |
| RPB2 dataset | Substitution model (BI) | GTR+I+G | SYM+I+G | SYM+G | GTR+I+G |
| Substitution model (ML) | K2+G | K2+G | TN93+G | K2+G | |
| Length (bp) | 1821 | 1619 | 1782 | 1845 | |
| Concatenated dataset | Substitution model (BI) | GTR+G | SYM+I+G | GTR+I+G | GTR+I+G |
| Substitution model (ML) | K2+I | TN93+G | K2+G | T92+I+G | |