Table 3. Primers and RNAs used in this study.
Category | Primer and RNA name | Sequence (5′-3′) |
---|---|---|
RNAs | cgi-miR-2d mimics | UAUCACAGCCUGCUUGGAUCAGU UGAUCCAAGCAGGCUGUGAUAUU |
Positive control | GUGUAUCACAGAAAAUCCCU GGAUUUUCUGUGAUACACUU | |
miRNA control | UUCUCCGAACGUGUCACGUTT ACGUGACACGUUCGGAGAATT | |
cgi-miR-2d inhibitor | ACUGAUCCAAGCAGGCUGUGAUA | |
UTR clone primers | CgIκB2_UTRclone_F | TATTACAATCTGGTGCCGATGTGA |
AP-dT | GGCCACGCGTCGACTAGTACT17 | |
CgIκB2_mutate_F | AGCTGACGACGACACTATGGCTGATTG | |
CgIκB2_mutate_R | ACAATCAGCCATAGTGTCGTCGTCAGC | |
Recombination primers | CgIκB2 _ XhoI | CTCGAGAGAAAGGACTGCCGAA |
CgIκB2 _ NotI | GCGGCCGCTTTAGACTTGTC | |
RNAi clone primers | siCgIκB2 _basic_F | AGACCCATGCAAAATCTGGAC |
siCgIκB2 _basic_R | CTTCTTCCTCCTCCGATTCATC | |
siCgIκB2_T7_F | TAATACGACTCACTATAGGGATC AGACCCATGCAAAATCTGGAC | |
siCgIκB2_T7_R | TAATACGACTCACTATAGGGATC CTTCTTCCTCCTCCGATTCATC | |
siEGFP_basic_F | CGACGTAAACGGCCACAAGT | |
siEGFP_basic_R | CTTGTACAGCTCGTCCATGC | |
siEGFP_T7_F | TAATACGACTCACTATAGGGA TCCGACGTAAACGGCCACAAGT | |
siEGFP_T7_R | TAATACGACTCACTATAGGGATC CTTGTACAGCTCGTCCATGC | |
Real-Time primers | GAPDH_F | AGGTCGGTGTGAACGGATTTG |
GAPDH_R | TGTAGACCATGTAGTTGAGGTCA | |
EF-F | AGTCACCAAGGCTGCACAGAAAG | |
EF_R | TCCGACGTATTTCTTTGCGATGT | |
CgIκB1 _RT_F | CCCTTCACATTGCCAGTAG | |
CgIκB1 _RT_R | ATTGGGAGATGGGTGTTCT | |
CgIκB2 _RT_F | CGAGTGATGAATCGGAGGAGG | |
CgIκB2 _RT_R | CACACAATCAGCCAATCACAGC | |
CgIκB3 _RT_F | ACCTCCCCTCCCTACAACCTCAGACT | |
CgIκB3 _RT_R | CCTGGTGACATGGAATGGGCAACT | |
cgi-miR-2d | TATCACAGCCTGCTTGGATCAGT | |
rRNA_5s | CAAGGATGACACGCAAAT |