Table 2.
Summary of sequence data.
| Sample ID | Raw dataset | Filtered dataset | ||||||
|---|---|---|---|---|---|---|---|---|
| Total reads | Base count (Mb) | Mean read length | No. of reads | Base count (Mb) | Mean read length | % passed | Target covered (%) | |
| BLP1 | 468,655 | 179.2 | 382 | 434,193 | 149.6 | 344 | 92.6 | 70.6 |
| BLP2 | 544,069 | 206.1 | 379 | 503,649 | 173 | 343 | 92.6 | 71.7 |
| BHP1 | 604,742 | 229.7 | 380 | 555,099 | 195 | 351 | 91.8 | 63.3 |
| BHP2 | 629,606 | 240.7 | 382 | 580,983 | 204.8 | 352 | 92.3 | 65.5 |
| MLP2 | 573,466 | 213 | 371 | 530,089 | 176.3 | 332 | 92.4 | 67.2 |
| MLP5 | 437,957 | 165.4 | 378 | 407,996 | 137.1 | 336 | 93.2 | 73.3 |
| MHP1 | 544,403 | 197.3 | 362 | 498,613 | 163.2 | 327 | 91.6 | 70.2 |
| MHP2 | 657,400 | 238.4 | 363 | 602,554 | 197.3 | 327 | 91.7 | 62.8 |
| JLP1 | 632,961 | 249 | 393 | 594,251 | 213.9 | 359 | 93.9 | 65.3 |
| JLP2 | 576,284 | 227.3 | 394 | 541,456 | 195.4 | 360 | 94 | 66.3 |
| JHP1 | 447,055 | 172.3 | 385 | 413,569 | 145.1 | 350 | 92.5 | 76.4 |
| JHP2 | 445,066 | 180 | 404 | 413,702 | 151.7 | 366 | 93 | 74.3 |
| 6,561,664 (total) | 2,498 (total) | 381 (average) | 6,076,154 (total) | 2,102 (total) | 346 (average) | 92.6 (average) | 67.8 (average) | |