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. Author manuscript; available in PMC: 2016 Jul 12.
Published in final edited form as: J Phys Chem B. 2015 Sep 4;119(37):12182–12192. doi: 10.1021/acs.jpcb.5b07115

Table 4.

Selected bond lengths, partial charges, proton dissociation energies (De), and relative energies for [(ImH)2Zn–S(H)CH3]2+ (top set) and [(ImH)3Zn–S(H)CH3]2+ (bottom set) as a function of S–Zn–Nn angles. Values from M05-2X/cc-pVDZ calculations.

Bond angles Bond lengths (Å) Partial charges (a.u.) Energies (kJ/mol)
(S–H) PDE Relativec
Zn–S S–H Zn–(N)na Zn H S (ImH)nb Thiol (Thiolate)

∠SZn(ImH)2 Zn–(ImH)2 (ImH)2
95° 2.565 1.3536 1.943 0.760 0.168 −0.062 0.921 680 36.7 (75.5)
105° 2.460 1.3545 1.948 0.727 0.175 −0.009 0.882 662 10.0 (30.7)
115° 2.398 1.3554 1.957 0.697 0.182 0.034 0.856 651 0.6 (10.1)
120° 2.377 1.3556 1.963 0.689 0.185 0.050 0.840 647 0.5 (6.1)
125° 2.358 1.3560 1.972 0.685 0.188 0.060 0.829 642 3.5 (4.2)
135° 2.327 1.3563 2.009 0.671 0.193 0.080 0.804 627 28.8 (14.5)
Δ(135°−95°) −0.238 0.0027 0.066 −0.089 0.025 0.142 −0.117 −53
fully optd 2.385 1.3557 1.960 0.699 0.186 0.035 0.842 641 0.0 (0.0)

∠SZn(ImH)3 Zn–(ImH)3 (ImH)3
85° 2.857 1.3513 1.997 0.699 0.129 −0.097 1.125 813 57.8 (129.4)
95° 2.592 1.3522 2.006 0.626 0.143 −0.041 1.106 770 18.9 (47.3)
105° 2.473 1.3527 2.016 0.570 0.155 0.004 1.085 750 1.6 (9.9)
110° 2.436 1.3533 2.024 0.548 0.161 0.021 1.074 741 1.4 (0.9)
115° 2.409 1.3536 2.036 0.543 0.167 0.030 1.062 737 7.0 (3.2)
125° 2.361 1.3546 2.084 0.548 0.179 0.055 0.997 722 49.2 (30.4)
Δ(125°−85°) −0.496 0.0033 0.087 −0.151 0.050 0.152 −0.128 −91
fully optd 2.454 1.3528 2.020 0.567 0.163 −0.005 1.079 741 0.0 (0.0)
a

average Zn–Nn distance,

b

total charge on the zinc coordinated imidazole ligands,

c

Energy of the constrained thiol and (thiolate) relative to their fully optimized (ImH)2 and (ImH)3 complexes.

d

Fully opt numbers are from optimizations with no constraints, in which the average ∠SZn(ImH)2 = 117.6° and the average ∠SZn(ImH)3 = 108.0°, for the thiol complexes