Table 5.
Nucleotide reads in partial sequences at positions where polymorphisms in the HA full‐length sequences were identified
| Group | Ref.a | Posb | Readc | Freq. d |
|---|---|---|---|---|
| NAIVE (n = 12) e | C | 282 |
C T Nf |
10 1 1 |
| A | 15 | A | 12 | |
| G | 515 |
G A N |
7 3 2 |
|
| A | 617 |
A N |
11 1 |
|
| PASSIV‐VAC (n = 16) | T | 1194 | T | 16 |
| G | 515 |
G A – |
11 4 1 |
|
| A | 563 |
A – |
14 2 |
|
| G | 454 |
G – |
15 1 |
|
| A | 1382 |
A C N |
12 1 3 |
a
Reference nucleotide according to reference sequence.
b
Position based on the full‐length HA sequence.
c
Nucleotide read at the indicated position.
d
Frequency: number of times the specified read was found.
e
Number of partial HA sequences obtained.
f
N: Ambiguous nucleotide.