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. Author manuscript; available in PMC: 2016 Aug 1.

Published in final edited form as: J Biomol NMR. 2015 Jun 17;62(4):439–451. doi: 10.1007/s10858-015-9955-2

Table 4.

RPF results for reference PDB structures with raw, filtered and refined NOESY peak lists

	Raw			Raw with noise filter			Manual
Name	Recall	Precision	DP	Recall	Precision	DP	Recall	Precision	DP
HR2876B^a	0.645	0.940	0.590	0.862	0.875	0.787	0.989	0.963	0.919
HR2876C^a	0.737	0.951	0.645	0.802	0.904	0.707	0.959	0.976	0.891
HR5460A^a	0.680	0.884	0.592	0.859	0.840	0.736	0.965	0.956	0.860
HR6430A^b	0.958	0.955	0.857	0.958	0.955	0.857	0.986	0.973	0.932
HR6470A^b	0.975	0.934	0.849	0.975	0.934	0.849	0.993	0.960	0.898
HR8254A^c	0.434	0.972	0.394	0.901	0.849	0.736	0.965	0.936	0.827
OR135^a	0.848	0.931	0.721	0.926	0.871	0.743	0.971	0.972	0.889
OR36^a	0.706	0.911	0.579	0.898	0.853	0.733	0.990	0.966	0.904
StT322^c	0.454	0.894	0.325	0.858	0.754	0.553	0.963	0.840	0.748
YR313A^a	0.627	0.913	0.456	0.832	0.857	0.642	0.988	0.947	0.848

^a

The NOESY peak intensity filtering used protocol CASE A.

^b

No NOESY peak intensity filtering was required.

^c

The NOESY peak intensity filtering could not use protocol CASE A and instead used protocol CASE B.