Table 2.
Up-regulated genes | Down-regulated genes | ||||||||
---|---|---|---|---|---|---|---|---|---|
Rank | Genes | Fold change | P-value | Fold change in fish brains | Rank | Genes | Fold change | P-value | Fold change in fish brains |
1 | OPRK1 | 4.03 | 0.000 | −0.29 | 17673 | CMKLR1 | −2.81 | 0.000 | 0.86 |
2 | NEUROG2 | 3.55 | 0.000 | 17672 | ADAMTS2 | −2.74 | 0.000 | 0.09 | |
3 | VSNL1 | 3.19 | 0.000 | 2.84 | 17671 | HIST1H4L | −2.67 | 0.000 | |
4 | GALNAC4S-6ST | 3.09 | 0.000 | 0.96 | 17670 | ELFN1 | −2.44 | 0.000 | |
5 | POSTN | 2.93 | 0.000 | 1.22 | 17669 | COL4A2 | −2.39 | 0.000 | −0.42 |
6 | EVX2 | 2.86 | 0.000 | 17668 | GREM2 | −2.33 | 0.000 | ||
7 | SERPINE1 | 2.69 | 0.000 | −1.45 | 17667 | FLJ45455 | −2.32 | 0.000 | 0.86 |
8 | ODZ1 | 2.64 | 0.000 | 17666 | VCAN | −2.31 | 0.000 | ||
9 | DRD5 | 2.34 | 0.000 | −0.23 | 17665 | SOCS3 | −2.29 | 0.000 | 0.02 |
10 | CSGALNACT1 | 2.33 | 0.001 | 17664 | TGFBI | −2.27 | 0.000 | −1.11 | |
11 | HOXD13 | 2.31 | 0.000 | 17663 | C11orf53 | −2.26 | 0.000 | ||
12 | C3orf57 | 2.29 | 0.000 | 17662 | SNAI1 | −2.17 | 0.000 | −0.82 | |
13 | B3GALT1 | 2.29 | 0.000 | 17661 | LOC283480 | −2.11 | 0.000 | ||
14 | SECTM1 | 2.28 | 0.001 | 17660 | ID1 | −2.05 | 0.000 | 0.23 | |
15 | PLAU | 2.20 | 0.001 | 17659 | PPP1R9A | −2.03 | 0.000 | −0.05 | |
16 | PDE1A | 2.19 | 0.000 | 17658 | LOC646498 | −2.02 | 0.004 | ||
17 | VIM | 2.14 | 0.000 | 0.25 | 17657 | RPS16P5 | −2.02 | 0.000 | |
18 | MME | 2.11 | 0.000 | 17656 | COL4A1 | −1.98 | 0.000 | 0.10 | |
19 | KCNJ2 | 2.09 | 0.000 | 17655 | GLT8D2 | −1.98 | 0.000 | ||
20 | HS6ST2 | 2.09 | 0.000 | −0.15 | 17654 | CYP26A1 | −1.96 | 0.000 | 0.26 |
21 | SNORA42 | 2.00 | 0.003 | 17653 | SLC10A1 | −1.95 | 0.004 | ||
22 | RASEF | 1.99 | 0.000 | 0.31 | 17652 | PART1 | −1.94 | 0.000 | |
23 | APOL6 | 1.93 | 0.000 | 17651 | OXTR | −1.89 | 0.000 | 1.26 | |
24 | NCRNA00164 | 1.91 | 0.007 | 17650 | PTPLAD2 | −1.84 | 0.007 | ||
25 | COLQ | 1.91 | 0.000 | 17649 | C9orf131 | −1.83 | 0.001 | ||
26 | CACNA2D3 | 1.90 | 0.000 | 0.90 | 17648 | FOS | −1.80 | 0.000 | −0.63 |
27 | DEGS2 | 1.90 | 0.000 | 17647 | C9orf135 | −1.79 | 0.009 | ||
28 | NHS | 1.89 | 0.000 | 17646 | GLP1R | −1.79 | 0.000 | ||
29 | PTER | 1.89 | 0.001 | 0.11 | 17645 | ETS1 | −1.79 | 0.000 | −0.79 |
30 | EDIL3 | 1.87 | 0.000 | −0.41 | 17644 | NXPH3 | −1.79 | 0.000 | |
31 | INSM2 | 1.85 | 0.000 | 17643 | LOC100128505 | −1.79 | 0.013 | ||
32 | GFRA3 | 1.82 | 0.000 | 17642 | KCTD12 | −1.76 | 0.000 | 0.49 | |
33 | PROKR2 | 1.82 | 0.000 | 17641 | ANGPTL4 | −1.74 | 0.000 | ||
34 | GRM8 | 1.81 | 0.001 | 17640 | FOSB | −1.73 | 0.000 | ||
35 | TLE4 | 1.79 | 0.000 | 17639 | MPPED2 | −1.72 | 0.000 | −0.62 | |
36 | WNT5A | 1.77 | 0.001 | −0.38 | 17638 | C11orf92 | −1.71 | 0.003 | |
37 | SMOC2 | 1.77 | 0.000 | −0.26 | 17637 | WDR38 | −1.69 | 0.001 | |
38 | VCAM1 | 1.76 | 0.014 | 0.53 | 17636 | GALNT14 | −1.68 | 0.000 | 0.03 |
39 | FRMD4B | 1.74 | 0.000 | 0.10 | 17635 | LOC283143 | −1.67 | 0.002 | |
40 | PTRF | 1.74 | 0.000 | 17634 | ACCN1 | −1.66 | 0.002 | ||
41 | DLK1 | 1.70 | 0.000 | 0.69 | 17633 | C14orf53 | −1.66 | 0.002 | |
42 | PTCHD1 | 1.67 | 0.001 | 17632 | TAPBPL | −1.65 | 0.021 | ||
43 | GPR126 | 1.66 | 0.022 | 17631 | NRP1 | −1.63 | 0.000 | 1.12 | |
44 | ANKDD1B | 1.65 | 0.000 | 17630 | BFSP2 | −1.63 | 0.002 | ||
45 | MOXD1 | 1.65 | 0.002 | −1.00 | 17629 | SMAD7 | −1.63 | 0.000 | 0.08 |
46 | FAM111B | 1.65 | 0.000 | 17628 | HOPX | −1.62 | 0.028 | ||
47 | LOC728739 | 1.63 | 0.002 | 17627 | ERBB4 | −1.62 | 0.000 | ||
48 | CHRNA10 | 1.62 | 0.002 | 17626 | PAPPA2 | −1.62 | 0.000 | ||
49 | NELL1 | 1.62 | 0.000 | 17625 | PCDHGB8P | −1.62 | 0.011 | ||
50 | NELL2 | 1.62 | 0.000 | −0.76 | 17624 | LOC284454 | −1.60 | 0.000 |
Table representing the list of 50 most up- and down-regulated genes in human neuronal cells treated with the valproate. Genes were ranked based on their expression in fold- change in human cells. P-value represents the significance level of the expression change in the mixture treatment than control. Corresponding fold change of genes in fish brains is also reported in this table, where blank cells represents genes that are not found in the fish microarray chip