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. Author manuscript; available in PMC: 2016 Nov 2.
Published in final edited form as: Nature. 2016 May 2;534(7606):200–205. doi: 10.1038/nature17993

Figure 3. Genetic clustering.

Figure 3

(A) Shared genetic drift measured by f3(X,Y; Mbuti) among samples with at least 30,000 SNPs covered (for AfontovaGora3, ElMiron, Falkenstein, GoyetQ-2, GoyetQ53-1, HohleFels49, HohleFels79, LesCloseaux13, Ofnet, Ranchot88 and Rigney1, we use all sequences for higher resolution). Lighter colors indicate more shared drift. (B) Multidimensional Dimensional Scaling (MDS) analysis, computed using the R software cmdscale package, highlights the main genetic groupings analyzed in this study: Vestonice Cluster (brown), Mal’ta Cluster (pink), El Mirón Cluster (yellow), Villabruna Cluster (light blue), and Satsurblia Cluster (dark purple). The affinity of GoyetQ116-1 (green) to the El Mirón Cluster is evident in both views of the data.