Table 3.
SNP rs number | Genotype | Frequencies (%) | Allele | Dominant | Recessive | ||||
---|---|---|---|---|---|---|---|---|---|
Controls (SLE) | Cases (SLE_ONFH) | OR (95% CI) | P | OR (95% CI) | P | OR (95% CI) | P | ||
rs3813946 | TT | 102 (71.83) | 35 (71.43) | ||||||
CT | 39 (27.46) | 10 (20.41) | 1.33 (0.73–2.45) | 0.353 | 1.02 (0.50–2.10) | 0.957 | 12.5 (1.37–115) | 0.016∗ | |
CC | 1 (0.7) | 4 (8.16) | |||||||
| |||||||||
rs311306 | GG | 108 (72.97) | 35 (70.0) | ||||||
CG | 39 (26.35) | 10 (20.0) | 1.56 (0.86–2.81) | 0.141 | 1.16 (0.57–2.34) | 0.685 | 16.3 (1.86–143) | 0.004∗ | |
CC | 1 (0.68) | 5 (10.0) | |||||||
| |||||||||
rs1567190 | TT | 49 (33.11) | 22 (44.0) | ||||||
CT | 74 (50.0) | 22 (44.0) | 0.72 (0.45–1.15) | 0.164 | 0.63 (0.33–1.21) | 0.165 | 0.67 (0.26–1.74) | 0.411 | |
CC | 25 (16.89) | 6 (12.0) | |||||||
| |||||||||
rs17615 (S639N) | GG | 108 (73.47) | 36 (73.47) | ||||||
AG | 39 (26.53) | 10 (20.41) | 1.28 (0.68–2.40) | 0.450 | 1.0 (0.48–2.08) | 1 | 0.015∗ | ||
AA | 0 (0) | 3 (6.12) | |||||||
| |||||||||
rs17045328 | AA | 78 (53.06) | 31 (64.58) | ||||||
AG | 61 (41.5) | 14 (29.17) | 0.74 (0.43–1.29) | 0.292 | 0.62 (0.32–1.22) | 0.163 | 1.16 (0.30–4.55) | 0.734∗ | |
GG | 8 (5.44) | 3 (6.25) | |||||||
| |||||||||
rs12032512 | CC | 47 (31.76) | 16 (32.0) | ||||||
CG | 78 (52.7) | 23 (46.0) | 1.14 (0.72–1.79) | 0.587 | 0.99 (0.50–1.97) | 0.975 | 1.53 (0.69–3.42) | 0.295 | |
GG | 23 (15.54) | 11 (22.0) | |||||||
| |||||||||
rs6690215 | CC | 41 (27.7) | 20 (40.0) | ||||||
CT | 77 (52.03) | 17 (34.0) | 0.88 (0.55–1.38) | 0.569 | 0.58 (0.29–1.12) | 0.103 | 1.38 (0.65–2.92) | 0.396 | |
TT | 30 (20.27) | 13 (26.0) | |||||||
| |||||||||
rs17045468 | CC | 79 (53.74) | 30 (60.0) | ||||||
CT | 61 (41.5) | 17 (34.0) | 0.87 (0.51–1.49) | 0.616 | 0.78 (0.40–1.49) | 0.442 | 1.28 (0.32–5.14) | 0.716∗ | |
TT | 7 (4.76) | 3 (6.0) |
Genotype distributions are shown as number (%). Chi-square P values and odds ratio (95% CI) are shown. OR: odds ratio; CI: confidence interval.
∗Fisher's exact test.