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. 2016 Jul 11;90(15):6784–6798. doi: 10.1128/JVI.00095-16

TABLE 1.

Names and sequences of the primers used for cloning and mutagenesis

Primer Sensea Sequence (5′ → 3′)b Purposec
RT-S Forw. ACACAAAGACCTCCAACTTAGCTATCG RT, S segment
RT-M Forw. ACACAAAGACGGCTAACATGGTAAGG RT, M segment
RT-L Forw. ACACAAAGACGCCAAGATGCTTTTAGCG RT, L segment
UUKV-S-5NC Forw. AATCGTCTCTAGGTACACAAAGACCTCCAACTTAGCTATCG Cloning the S segment into pRF108 (pRF108-S)
UUKV-S-3NC Rev. AATCGTCTCTGGGACACAAAGACCCTCC
UUKV-M-5NC Forw. AATCGTCTCTAGGTACACAAAGACGGCTAACATGGTAAGG Cloning the M segment into pRF108 (pRF108-M)
UUKV-M-3NC Rev. AATCGTCTCGGGGACACAAAGACACGGCTACATGG
UUKV-L-5NC Forw. AATCGTCTCTAGGTACACAAAGACGCCAAGATGCTTTTAGCG Cloning the L segment into pRF108 (pRF108-L)
UUKV-L-3NC Rev. AATCGTCTCGGGGACACAAAGTCCGCCAAGATGGAAGTAAAGG
Mut-M-S Forw. CAAGGATTCAGTGGATTGTCAATCATCAATCATAGATCCCA Mutagenesis of the M segment (G2386A)
Mut-M-AS Rev. TGGGATCTATGATTGATGATTGACAATCCACTGAATCCTTG
a

Forw, forward; Rev, reverse.

b

The virus RNA sequence that is targeted is in italics, and the sequences introduced for cloning are in roman type. Underlined nucleotide sequences indicate a BsmBI restriction site. Bold nucleotides are the point mutations introduced in the M segment sequence of the UUKV lab strain.

c

RT, reverse transcription.