TABLE 1.
Primer | Sensea | Sequence (5′ → 3′)b | Purposec |
---|---|---|---|
RT-S | Forw. | ACACAAAGACCTCCAACTTAGCTATCG | RT, S segment |
RT-M | Forw. | ACACAAAGACGGCTAACATGGTAAGG | RT, M segment |
RT-L | Forw. | ACACAAAGACGCCAAGATGCTTTTAGCG | RT, L segment |
UUKV-S-5NC | Forw. | AATCGTCTCTAGGTACACAAAGACCTCCAACTTAGCTATCG | Cloning the S segment into pRF108 (pRF108-S) |
UUKV-S-3NC | Rev. | AATCGTCTCTGGGACACAAAGACCCTCC | |
UUKV-M-5NC | Forw. | AATCGTCTCTAGGTACACAAAGACGGCTAACATGGTAAGG | Cloning the M segment into pRF108 (pRF108-M) |
UUKV-M-3NC | Rev. | AATCGTCTCGGGGACACAAAGACACGGCTACATGG | |
UUKV-L-5NC | Forw. | AATCGTCTCTAGGTACACAAAGACGCCAAGATGCTTTTAGCG | Cloning the L segment into pRF108 (pRF108-L) |
UUKV-L-3NC | Rev. | AATCGTCTCGGGGACACAAAGTCCGCCAAGATGGAAGTAAAGG | |
Mut-M-S | Forw. | CAAGGATTCAGTGGATTGTCAATCATCAATCATAGATCCCA | Mutagenesis of the M segment (G2386A) |
Mut-M-AS | Rev. | TGGGATCTATGATTGATGATTGACAATCCACTGAATCCTTG |
Forw, forward; Rev, reverse.
The virus RNA sequence that is targeted is in italics, and the sequences introduced for cloning are in roman type. Underlined nucleotide sequences indicate a BsmBI restriction site. Bold nucleotides are the point mutations introduced in the M segment sequence of the UUKV lab strain.
RT, reverse transcription.