Table II. Top Gene Ontology or Function Pathways Enriched in Air Pollution Exposure Analysis.
Concept Name | Concept Database | # Genes in Concept | FDR q-value | Direction† |
---|---|---|---|---|
Ascorbate and aldarate metabolism | KEGG | 19 | 0.003 | ↑ |
oxygen transport | GOBP | 11 | 0.005 | ↓ |
Pentose and glucuronate interconversions | KEGG | 24 | 0.007 | ↓ |
Drug metabolism - cytochrome P450 | KEGG | 62 | 0.013 | ↓ |
Drug metabolism - other enzymes | KEGG | 39 | 0.017 | ↓ |
oxygen binding | GOMF | 32 | 0.019 | ↓ |
Retinol metabolism | KEGG | 54 | 0.024 | ↓ |
Other types of O-glycan biosynthesis | KEGG | 37 | 0.024 | ↓ |
gas transport | GOBP | 15 | 0.025 | ↓ |
detection of chemical stimulus involved in sensory perception | GOBP | 357 | 0.025 | ↑ |
RNA splicing, via endonucleolytic cleavage and ligation | GOBP | 10 | 0.029 | ↓ |
detection of chemical stimulus | GOBP | 388 | 0.029 | ↑ |
cellular glucuronidation | GOBP | 13 | 0.029 | ↓ |
uronic acid metabolic process | GOBP | 14 | 0.029 | ↓ |
glucuronate metabolic process | GOBP | 14 | 0.029 | ↓ |
Metabolism of xenobiotics by cytochrome P450 | KEGG | 63 | 0.030 | ↓ |
sensory perception of chemical stimulus | GOBP | 403 | 0.031 | ↑ |
glucuronosyltransferase activity | GOMF | 22 | 0.031 | ↓ |
olfactory receptor activity | GOMF | 320 | 0.031 | ↑ |
detection of stimulus involved in sensory perception | GOBP | 396 | 0.032 | ↑ |
negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage | GOBP | 23 | 0.033 | ↑ |
detection of chemical stimulus involved in sensory perception of smell | GOBP | 320 | 0.047 | ↑ |
Up direction signifies that most genes in the concept were hypermethylated in the south Durban group compared with the north Durban group. Vice versa for the down direction.