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. Author manuscript; available in PMC: 2017 Sep 1.
Published in final edited form as: J Appl Toxicol. 2016 Feb 6;36(9):1150–1162. doi: 10.1002/jat.3281

Table 5.

Classification Results for SVM Models with 18 Additional Variable Combinations

Noa. Variable Set Data Setb Sensitivity (%) Specificity (%) Accuracy (%)
7 h-CLAT + Toolbox + 6 properties Training 97 97 97
Test 95 100 96
8 KeratinoSens + Toolbox + Avg.Lys.Cys + 6 properties Training 99 100 99
Test 84 100 89
9 KeratinoSens + h-CLAT + Avg.Lys.Cys + 6 properties Training 97 92 96
Test 90 86 89
10 h-CLAT + Toolbox + Avg.Lys.Cys + 6 properties Training 96 96 96
Test 84 100 89
11 KeratinoSens + h-CLAT + Toolbox + 6 properties Training 96 96 96
Test 90 86 89
12 h-CLAT + KeratinoSens + 6 properties Training 94 89 93
Test 90 86 89
13 h-CLAT + Avg.Lys.Cys + KeratinoSens + Toolbox + Log P Training 91 96 93
Test 90 86 89
14 h-CLAT + Avg.Lys.Cys + 6 properties Training 96 92 95
Test 84 86 85
15 Avg.Lys.Cys + Toolbox + 6 properties Training 91 100 94
Test 79 100 85
16 h-CLAT + 6 properties Training 87 89 87
Test 90 86 89
17 h-CLAT + Toolbox + Log P Training 81 92 84
Test 84 100 89
18 Avg.Lys.Cys + KeratinoSens + 6 properties Training 93 96 94
Test 74 86 77
19 Avg.Lys.Cys + KeratinoSens + Toolbox + Log P Training 88 92 89
Test 79 86 81
20 Avg.Lys.Cys + 6 properties Training 85 100 89
Test 74 100 81
21 Toolbox + 6 properties Training 90 81 87
Test 84 71 81
22 KeratinoSens + Toolbox + 6 properties Training 91 85 89
Test 74 86 77
23 KeratinoSens + 6 properties Training 79 89 82
Test 74 86 77
24 6 properties only Training 68 89 73
Test 73 71 73

Abbreviations: 6 properties = molecular weight, log octanol:water partition coefficient, log water solubility, log vapor pressure, melting point, and boiling point; Avg.Lys.Cys = average depletion for lysine and cysteine peptides from the direct peptide reactivity assay; h-CLAT = human cell line activation test; log P = log octanol:water partition coefficient; No. = number; SVM = support variable machine; Toolbox = read-across using QSAR Toolbox.

a

Models are listed in descending order of the average accuracy of the test and training sets.

b

The training set of 94 substances contains 68 LLNA sensitizers and 26 LLNA nonsensitizers. The test set of 26 substances contains 19 LLNA sensitizers and 7 LLNA nonsensitizers.