Table 4. Primer used for direct PCR.
Gene | Premier | Nucleotide sequence(5′–3′) | fragment length(bp) |
---|---|---|---|
TcdA | NK1 | GGACATGGTAAAGATGAATTC | 546 |
NK2 | CCCAATAGAAGATTCAATATTAAGCTT | ||
TcdB | NK104 | GTGTAGCAATGAAAGTCCAAGTTTACGC | 204 |
NK105 | CACTTAGCTCTTTGATTGCTGCACCT | ||
Triose phosphate isomerase(tpi) | tpi-F | AAAGAAGCTACTAAGGGTACAAA | 230 |
tpi-R | CATAATATTGGGTCTATTCCTAC | ||
16SrRNA | B | CCGTCAATTCMTTTRAGTTT* | 270 |
PG-48 | CTCTTGAAACTGGGAGACTTG |
*M = A or C; R = A or G.