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. 2016 Jul 2;5:e16270. doi: 10.7554/eLife.16270

Table 1.

Candidate genes enriched in the eight independent screens for genes involved in centrosome loss-induced G1 arrest.

DOI: http://dx.doi.org/10.7554/eLife.16270.008

Enrichment compared to p53 Gene symbol Gene name or description Number of sgRNAs enriched out of total 6
1.0000 TP53 Tumor Protein P53 5/6
0.9386 TP53BP1 Tumor Protein P53 Binding Protein 1 4/6
0.9039 TRIM37 Tripartite Motif Containing 37 3/6
0.8895 USP28 Ubiquitin Specific Peptidase 28 4/6
0.8858 P21 Cyclin-Dependent Kinase Inhibitor 1A (P21, Cip1) 6/6
0.7559 CHD8 Chromodomain Helicase DNA Binding Protein 8 4/6
0.6945 FBXO42 F-Box Protein 42 3/6
0.6846 RNF20 Ring Finger Protein 20, E3 Ubiquitin Protein Ligase 3/6
0.6665 PCDHGC5 Protocadherin Gamma Subfamily C, 5 2/6
0.6604 TSPY8 Testis Specific Protein, Y-Linked 8 3/6
0.6395 RWDD3 RWD Domain Containing 3 2/6
0.6364 UGT1A9 UDP Glucuronosyltransferase 1 Family, Polypeptide A9 2/6
0.6285 PDSS1 Prenyl (Decaprenyl) Diphosphate Synthase, Subunit 1 2/6
0.6275 BPIFB4 BPI Fold Containing Family B, Member 4 2/6
0.6240 PCDHAC2 Protocadherin Alpha Subfamily C, 2 3/6
0.6218 CSNK2A1 Casein Kinase 2, Alpha 1 Polypeptide 2/6
0.6201 GAGE7 G Antigen 7 3/6
0.6119 WTAP Wilms Tumor 1 Associated Protein 2/6
0.6093 PRDM11 PR Domain Containing 11 2/6
0.6086 OR56A1 Olfactory Receptor, Family 56, Subfamily A, Member 1 2/6
0.6059 TBCEL Tubulin Folding Cofactor E-Like 2/6
0.5997 DNAJC9 DnaJ (Hsp40) Homolog, Subfamily C, Member 9 2/6
0.5991 NPIPL3 Nuclear Pore Complex Interacting Protein Family, Member B3 3/6
0.5987 SYDE1 Synapse Defective 1, Rho GTPase, Homolog 1 2/6
0.5959 TECPR2 Tectonin Beta-Propeller Repeat Containing 2 2/6
0.5683 STOML3 Stomatin (EPB72)-Like 3 2/6
0.5507 DVL3 Dishevelled Segment Polarity Protein 3 2/6

Log2 scaling of sgRNAs enrichment normalized to the top scoring hit p53. The sgRNAs for genes highlighted in red were validated in this study. For a gene to be scored as a candidate, at least two of its six sgRNAs were repeatedly enriched in independent screens, with the HiSeq reads at least 3 times higher than the average of the baseline read.