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. 2016 Jul 18;10(7):e0004847. doi: 10.1371/journal.pntd.0004847

Table 1. Characteristics of the Burkholderia pseudomallei antigens used in this study.

  Locus Bpsa Used name for protein array Protein namea Definitiona Functiona Genome locationb Expressed amino acidsc Tagd Protein locatione
1 BPSL0280 BPSL0280 FlgK flagellar hook-associated protein FlgK cell motility Chr. 1 total (aa 667) Strep e
2 BPSL1445 BPSL1445 - putative lipoprotein unknown Chr. 1 aa 23 to 195 Strep e/m
3 BPSL1661 BPSL1661-1001 - putative hemolysin-related protein unknown Chr. 1 aa 1 to 683 Strep e
4 BPSL1661 BPSL1661-1002 - putative hemolysin-related protein unknown Chr. 1 aa 1001 to 2000 Strep e
5 BPSL2030 BPSl2030 - putative exported protein unknown Chr. 1 aa 23 to 186 Strep e
6 BPSL2096 BPSL2096 - hydroperoxide reductase detoxification Chr. 1 total (aa 182) Strep/His c
7 BPSL2520 BPSL2520 - putative exported protein unknown Chr. 1 aa 22 to 198 Strep e
8 BPSL2522 BPSL2522 - outer membrane protein a precursor unknown Chr. 1 aa 23 to 224 Strep om
9 BPSL2697 BPSL2697 GroEL 60 kDa molecular chaperone GroEL protein folding and stabilisation Chr. 1 total (aa 546) Strep/His c
10 BPSL2698 BPSL2698 GroES 10 kDa molecular chaperone GroES protein folding and stabilisation Chr. 1 total (aa 97) Strep c
11 BPSL3319 BPSL3319 FliC flagellin cell motility Chr. 1 total (aa 388) Strep e
12 BPSS0476 BPSS0476 GroES 10 kDa chaperonin protein folding and stabilisation Chr. 2 total (aa 96) Strep c
13 BPSS0477 BPSS0477 GroEL 60 kDa chaperonin protein folding and stabilisation Chr. 2 total (aa 546) Strep/His c
14 BPSS0530 BPSS0530 - conserved hypothetical protein protein secretion, Type VI system Chr. 2 total (aa 453) Strep c
15 BPSS1385 BPSS1385 - ATP/GTP binding protein unknown Chr. 2 total (aa 328) Strep c
16 BPSS1516 BPSS1516 BopC effector protein[28] virulence, effector protein Chr. 2 total (aa 469) Strep c
17 BPSS1525 BPSS1525-79 BopE G-nucleotide exchange factor virulence, effector protein Chr. 2 aa 79 to 261 Strep e
18 BPSS1532 BPSS1532-344 BipB putative cell invasion protein virulence, effector protein Chr. 2 aa 1 to 344 Strep/His e
19 BPSS1722 BPSS1722 Mdh malate dehydrogenase citrate cycle Chr. 2 total (aa 327) Strep c
20 BPSS2141 BPSS2141 OppA periplasmic oligopeptide-binding protein precursor transport Chr. 2 aa 40 to 554 Strep p

a Locus name, protein name, definition and function were used from B. pseudomallei strain K96243 and obtained from Kyoto Encyclopedia of Genes and Genomes (KEGG) (www.genome.jp/kegg/)

b Location of the respective gene in the genome of B. pseudomallei K96243. Chr. 1 = chromosome 1; Chr.2 = chromosome 2

c Shows length and/or expressed part of the respective protein. Proteins were expressed without signal sequences and membrane domains. aa—amino acid; total—whole protein

d Tag indicates the used C-terminal amino acid sequence used for purification. Strep–Strep-tag; His–His-tag

e Protein location was determined by PSORTb 3.0.2 (Prediction of Protein Sorting Signals and Location Sites in Amino Acid Sequences) http://www.psort.org/psortb/

c–cytoplasm, e–extracellular, m–membrane, om–outer membrane, p—periplasm