Table 1.
Comparison of genome feature between two different strains of P. lilacinum.
| Features | P. lilacinum strain 36-1 | P. lilacinum India strain |
|---|---|---|
| District | Hubei province, China | Kanpur, India |
| Source | Nematode-eggs, soil | Tannery sludge rich in Cr |
| Genome size (Mb) | 37.61 | 40.02 |
| Coverage | 75 × | 200 × |
| Scaffold No. | 240 | 301 |
| Scaffold N50 (kb) | 1328 | 1827 |
| G+C content % | 58.57 | 58.57 |
| Repeat % | 2.4 | 1.68 |
| Protein-coding genes | 13,150 | 13,266 |
| Avg. Gene length (bp) | 1933 | 1512 |
| Gene density (No. gene per Mb) | 346 | 303 |
| tRNA | 103 | 91 |
| Insertions | 14,176 | 2106 |
| Deletions | 1744 | 14,433 |
| Inversions | 3657 | 3526 |
| SNPs (%) | 1.4(521,424) | 1.3(519,777) |
The genome rearrangement and SNPs were obtained by reciprocal comparison between this two P. lilacinum strains with MAUVE software.