Table 2. Kinetic Parameters of TxGH116 and Its Mutants for Hydrolysis of 4NP-Glycosides and Oligosaccharides.
kinetic
parameters (60 °C) |
temperature |
|||||
---|---|---|---|---|---|---|
protein | substrate | KM (mM) | kcat (s–1) | kcat/KM (mM–1 s–1) | optimum | Tm |
WT without N-term taga | 4NP β-d-glucoside | 0.18 ± 0.008 | 49.0 ± 0.8 | 272 | 75 °C | - |
4NP β-d-galactoside | 16.3 ± 0.94 | 255 ± 5 | 15.6 | |||
cellobiose | 0.25 ± 0.016 | 44.4 ± 0.7 | 178 | |||
laminaribiose | 0.27 ± 0.018 | 41.4 ± 0.7 | 153 | |||
WT with N-term tagb | 4NP β-d-glucoside | 0.21 ± 0.012 | 37.6 ± 0.6 | 179 | 75 °C | 81.3 °C |
D508H | 4NP β-d-glucoside | 110 ± 3 | 3.47 ± 0.17 | 0.031 | 65 °C | 66.5 °C |
D508N | 4NP β-d-glucoside | 41.0 ± 2.5 | 30.2 ± 0.71 | 0.74 | 60 °C | 67.2 °C |
R544W | 4NP β-d-glucoside | 0.26 ± 0.011 | 48.2 ± 0.53 | 186 | 60 °C | 76.2 °C |
R786H | 4NP β-d-glucoside | 15.7 ± 0.50 | 193 ± 2.4 | 12.3 | 70 °C | 73.9 °C |
Wild type without the N-terminal tag is used for comparison to R544W and R786H, which were purified in the same way as the crystallized protein.
Wild type with the N-terminal tag is used for comparison to D508H and D508N, which could not be digested with enterokinase without internal cleavage of the protein. Temperature optimum curves are shown in SI Figure S8A. Melting temperatures (Tm) for all mutant proteins are those for the fusion protein without removal of the N-terminal tag. All Tm values were determined based on the change in circular dichroism at 220 nm upon heating. The melting curves are provided in SI Figure S8B.