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. 2015 Sep 11;282(21):4218–4241. doi: 10.1111/febs.13417

Table 1.

Apparent steady‐state kinetic constants of PDH from A. meleagris and its variants for the electron donor GLC and the electron acceptor Fc+. GLC was probed with the standard Fc+ assay (50 mm sodium phosphate buffer, pH 7.5, 30 °C, fixed value of 0.2 mm Fc+ as electron acceptor). Fc+ was tested in 100 mm borate buffer, pH 8.5, 30 °C. The fixed GLC concentration was adjusted according to the K M value of the corresponding variant: 25 mm (nsAmPDH, recAmPDH, AmPDH), 50 mm (H103A, Q392A, V511W), 250 mm (Y510A) or 500 mm (H556A, H556N, V511F). ND, not determined

Variant GLC Fc+
K M (mm) k cat (s−1) k cat/K M (mm −1·s−1) K M (mm) k cat (s−1) k cat/K M (mm −1·s−1)
nsAmPDHc 0.82 ± 0.03 45.9 ± 0.3 57.5 0.13 ± 0.03 104 ± 8 802
recAmPDHa 0.69 ± 0.09 37.8 ± 1.1 54.8 0.16 ± 0.04 130 ± 11 812
AmPDHb 0.82 ± 0.01 42.2 ± 0.2 51.5 0.17 ± 0.02 135 ± 7 776
H556N 97.5 ± 4.1 6.40 ± 0.08 0.07 0.47 ± 0.04 22.5 ± 1.3 47.8
H556A 90.0 ± 3.5 12.8 ± 0.2 0.14 0.17 ± 0.01 20.4 ± 0.5 124
H512A 6.19 ± 1.24 0.0010 ± 0.0001 0.0002 ND ND ND
V511W 3.73 ± 0.17 18.6 ± 0.2 5.00 0.11 ± 0.01 38.0 ± 1.4 352
V511F 106 ± 5 19.9 ± 0.3 0.19 0.39 ± 0.03 26.4 ± 1.4 66.8
Y510A 60.7 ± 2.0 16.0 ± 0.2 0.26 0.49 ± 0.03 28.8 ± 1.3 59.2
Q392A 6.15 ± 0.21 24.5 ± 0.2 3.98 0.30 ± 0.02 111 ± 4 372
H103A 2.73 ± 0.11 15.6 ± 0.1 5.70 0.16 ± 0.01 34.5 ± 1.3 222
a

AmPDH produced in the natural source A. meleagris 2.

b

AmPDH recombinantly produced in P. pastoris 3.

c

AmPDH with a His6‐tag, recombinantly produced in P. pastoris (present study).