Table 2.
List of the 50 most highly expressed transcripts with their ontology and annotations in drought stressed leaf tissue compared to non-stressed control tissues.
| Gene id | Transcript coordinate | FPKM | GO ids | GO type | Annotation |
|---|---|---|---|---|---|
| Glyma01g04250 | Gm01:3750043–3752379 | 1240.53 | GO:0016758, GO:0008152 | F,P | UDP-glucosyl transferase 74B1 |
| Glyma02g47560 | Gm02:51103817–51104907 | 1116.26 | GO:0016020, GO:0009765 | C,P | Photosystem II light harvesting complex gene 2.1 |
| Glyma03g28760 | Gm03:36707978–36709723 | 727.11 | Dehydration-induced protein (ERD15) | ||
| Glyma03g32850 | Gm03:40584884–40588047 | 1085.75 | GO:0000902, GO:0005524 | P,F | Heat shock cognate protein 70-1 |
| Glyma03g38190 | Gm03:44586431–44589302 | 682.88 | GO:0004478, GO:0006556, GO:0005524 | F,P,F | S-adenosylmethionine synthetase 1 |
| Glyma04g01130 | Gm04:710034–711409 | 1682.80 | GO:0006950, GO:0009415 | P,P | Cold-regulated 47 |
| Glyma04g13490 | Gm04:13109642–13110739 | 741.79 | GO:0004857, GO:0030599 | F,F | Plant invertase/pectin methylesterase inhibitor superfamily protein |
| Glyma05g13900 | Gm05:14595247–14597672 | 916.44 | GO:0005509, GO:0007165, GO:0005578 | F,P,C | Calmodulin 5 |
| Glyma05g25810 | Gm05:31881851–31883064 | 1774.57 | GO:0016020, GO:0009765 | C,P | Chlorophyll A/B binding protein 1 |
| Glyma05g28971 | Gm05:34684777–34684906 | 1198.80 | Conserved peptide upstream open reading frame 5 | ||
| Glyma06g37260 | Gm06:39710119-39711559 | 746.98 | Metallothionein 3 | ||
| Glyma07g01730 | Gm07:1142812–1144391 | 2262.09 | GO:0003993 | F | HAD superfamily, subfamily IIIB acid Phosphatase |
| Glyma07g14340 | Gm07:13708523–13710623 | 668.66 | GO:0005509, GO:0015979, GO:0009523, GO:0009654, GO:0019898 | F,P,C,C,C | Photosystem II subunit Q-2 |
| Glyma07g35310 | Gm07:40444012–40444809 | 2503.19 | unknown function | ||
| Glyma08g08770 | Gm08:6268663–6270567 | 1081.30 | GO:0016020, GO:0009765 | C,P | Chlorophyll A/B binding protein 1 |
| Glyma08g18510 | Gm08:13903708–13906551 | 1856.61 | GO:0015979, GO:0009523, GO:0009654, GO:0042651 | P,C,C,C | Photosystem II subunit R |
| Glyma09g15450 | Gm09:17990279–17992556 | 657.97 | GO:0006952, GO:0009607 | P,P | MLP-like protein 34 |
| Glyma09g36210 | Gm09:42033362–42033506 | 928.14 | ROTUNDIFOLIA Like 12 | ||
| Glyma10g35871 | Gm10:44076742–44077667 | 1098.55 | Unknown function | ||
| Glyma11g18640 | Gm11:15274089–15277211 | 690.62 | Photosystem I subunit O | ||
| Glyma11g21616 | Gm11:18750278–18750868 | 1923.28 | GO:0005199 | F | Unknown function |
| Glyma11g34230 | Gm11:36096506–36100186 | 1518.22 | GO:0005524 | F | Rubisco activase |
| Glyma12g01120 | Gm12:632601–632745 | 2063.58 | ROTUNDIFOLIA like 12 | ||
| Glyma12g05150 | Gm12:3432975–3436225 | 850.75 | Cold-regulated 413-plasma membrane 2 | ||
| Glyma13g07610 | Gm13:7807012–7808518 | 4066.37 | GO:0016984, GO:0015977 | F,P | Ribulose bisphosphate carboxylase (small chain) family protein |
| Glyma14g01130 | Gm14:609754–611622 | 1241.04 | GO:0016020, GO:0009765 | C,P | Photosystem II light harvesting complex gene 2.1 |
| Glyma14g06310 | Gm14:4555027–4555301 | 1666.99 | GO:0003735, GO:0006412, GO:0005840 | F,P,C | Unknown function |
| Glyma14g09620 | Gm14:7694931–7696850 | 813.56 | Gibberellin-regulated family protein | ||
| Glyma14g26450 | Gm14:32499281–32499395 | 1811.64 | Rhodanese/cell cycle control phosphatase superfamily protein | ||
| Glyma15g04641 | Gm15:3229565–3229843 | 1209.88 | Unknown function | ||
| Glyma15g21890 | Gm15:20279966–20282600 | 782.01 | GO:0004478, GO:0006556, GO:0005524 | F,P,F | S-adenosylmethionine synthetase family protein |
| Glyma15g38091 | Gm15:44167213–44170746 | 664.74 | Unknown function | ||
| Glyma15g40450 | Gm15:47454286–47457571 | 896.08 | GO:0015979, GO:0009523, GO:0009654, GO:0042651 | P,C,C,C | Photosystem II subunit R |
| Glyma16g04190 | Gm16:3559705–3561111 | 1309.08 | Unknown function | ||
| Glyma16g04240 | Gm16:3592381–3597724 | 922.43 | GO:0003871, GO:0009086, GO:0008270, GO:0008652 | F,P,F,P | Cobalamin-independent synthase family protein |
| Glyma16g04471 | Gm16:3775380–3776171 | 963.52 | Arabinogalactan protein 14 | ||
| Glyma16g10880 | Gm16:11230916–11238976 | 678.00 | GO:0070402, GO:0055114, GO:0005515, GO:0046872, GO:0030604, GO:0008299 | F,P,F,F,F,P | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
| Glyma17g14481 | Gm17:11219871–11220289 | 833.51 | Sterol-4alpha-methyl oxidase 1-1 | ||
| Glyma17g23900 | Gm17:24100696–24103526 | 1014.65 | GO:0003924, GO:0005525 | F,F | GTP binding elongation factor Tu family protein |
| Glyma17g24193 | Gm17:24549687–24552917 | 939.43 | Dehydrin family protein | ||
| Glyma17g37760 | Gm17:41489218–41490300 | 672.50 | GAST1 protein homolog 1 | ||
| Glyma18g04081 | Gm18:2844663–2849361 | 1656.20 | GO:0005524 | F | Rubisco activase |
| Glyma19g01050 | Gm19:738803–744963 | 1031.96 | GO:0004089, GO:0008270, GO:0015976 | F,F,P | Carbonic anhydrase 1 |
| Glyma19g06370 | Gm19:7281535–7282880 | 943.91 | GO:0016984, GO:0015977 | F,P | Ribulose bisphosphate Carboxylase (small chain) family protein |
| Glyma19g28240 | Gm19:35628975–35631849 | 753.35 | GO:0016620, GO:0055114 | F,P | Glyceraldehyde 3-phosphate dehydrogenase A subunit 2 |
| Glyma19g29210 | Gm19:36800698–36804173 | 916.02 | Unknown function | ||
| Glyma19g40810 | Gm19:47126360–47129191 | 778.31 | GO:0004478, GO:0006556, GO:0005524 | F,P,F | S-adenosylmethionine synthetase 2 |
| Glyma20g26871 | Gm20:36185308–36186074 | 2273.27 | GO:0003735, GO:0006412, GO:0005622, GO:0005840 | F,P,C,C | Ribosomal protein S14p/S29e family protein |
| Glyma20g27950 | Gm20:36940855–36943164 | 1158.99 | GO:0005515 | F | Polyubiquitin 10 |
| Glyma20g28890 | Gm20:37838080–37839638 | 706.21 | Chlorophyll A-B binding family protein |