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. 2016 Jul 19;23:18. doi: 10.1186/s40709-016-0053-8

Table 2.

Candidate reference genes were used for the assessment of the expression stability in qPCR analysis

Gene symbol Accession no. Name GO annotation e-value Primer sequencec Amlicon size
ACT11 EE594539.1 Actin-11 Structural constituent of cytoskeleton 1 × 10−66 GTATGGCAACATTGTCCTCAG
TGGAGCAACGACCTTGAT
118
U2SURP EE594692.1 U2snRNP-associated SURP motif-containing protein-like RNA binding, required for spliceosome assembly to participate in splicing 3 × 10−55 CGTGGATGAGATTGAGAGGAA
TGGAGGACTACGGCTTCTA
199
EF1A EE594715.1 Elongation factor-1 alpha Translation elongation factor activity 1 × 10−04 TGCTGTCGGTGTCATCAA
CTTCCATCAAACGCCTCATT
97
UBQ EE594598.1 Ubiquitin-like protein Biologically significant role in protein delivery to proteasomes and recruitment of proteasomes to transcription sites. 9 × 10−19 CTTGGTCTGCTGTTGTCTTG
CACGGTTCACTTATCCATCAC
200
TUB EE594551.1 Beta-tubulin chain-like Microtubule-based process and structural constituent of cytoskeleton 5 × 10−20 TGCTGCCTGCTGTATCTT
CGGAGGAACTTACTACTACATACT
109
eIF3 Jk671263 Eukaryotic translation initiation factor 3 subunit B-like Translation initiation factor activity 1 × 10−90 CCGCCATCGCTACTGTCTCC
CCTCTTGCGCTCCTGTTCACT
126
GTF JZ191082.1 General transcription factor 3C polypeptide Involved in RNA polymerase III-mediated transcription 8 × 10−39 TTCCAAGTGGCCATCAGGTT
AAAGGGCTTCCTGCCTCTTG
108
RPS12 JZ191056.1 40S ribosomal protein S12-like Structural constituent of ribosome involved in RNA methylation, photorespiration, translation 1 × 10−91 TTGGCAGACTCACGAAGG
GATGGCGGATCAGGAGAC
147
GAPDH JN604531.1 glyceraldehyde-3-phosphate dehydrogenase Dehydrogenase, Oxidoreductase in glycolysis and gluconeogenesis 0.0 TGGGCAAGATTAAGATCGGAAT
TTGATGTCGCTGTGCTTCCA
184
RPS3 JZ191044.1 40S ribosomal protein S3-like Structural constituent of ribosome involved in RNA methylation, photorespiration, translation 2 × 10−59 ATTCACTGGCTGACCGGATG
GTGCCAAGGGTTGTGAGGTC
107

Gene names are denoted base on gene ontology and TAIR annotations