Table 2. Protein features and transcriptional profiles of selected candidate genes.
Pf Gene Name | Protein Feature | Upregulated transcription in LS vs | ||||
---|---|---|---|---|---|---|
Protein Length | TM | SP | PEXEL/VTS | BS | SS | |
PF3D7_0304600 (CSP) | 397 | 1 | 1 | 2 | Yes | No |
PF3D7_0730200a | 858 | 0 | 0 | 0 | Yes | Yes |
PF3D7_1323000a | 230 | 1 | 1 | 0 | Yes | Yes |
PF3D7_1411500a | 947 | 0 | 0 | 0 | Yes | Yes |
PF3D7_1418100 (LISP1)a | 3597 | 0 | 0 | 0 | Yes | Yes |
PF3D7_1207400a | 395 | 0 | 0 | 0 | Yes | No |
PF3D7_1241500a | 420 | 0 | 0 | 0 | Yes | Yes |
PF3D7_1308500b | 359 | 0 | 0 | 0 | Yes | No |
PF3D7_0727200b | 553 | 0 | 0 | 1 | Yes | No |
PF3D7_0818900b | 677 | 0 | 0 | 1 | Yes | Yes |
PF3D7_1111200b | 594 | 0 | 0 | 0 | Yes | Yes |
PF3D7_1122200b | 446 | 0 | 0 | 0 | Yes | Yes |
PF3D7_1134000b | 663 | 0 | 0 | 0 | Yes | Yes |
PF3D7_1147000 (SLARP)b | 2940 | 0 | 0 | 0 | Yes | No |
PF3D7_1302200b | 229 | 2 | 1 | 0 | Yes | No |
PF3D7_1434400b | 285 | 1 | 0 | 0 | Yes | No |
PF3D7_1456100b | 462 | 0 | 0 | 0 | Yes | Yes |
PF3D7_0103400b | 1620 | 0 | 0 | 0 | Yes | No |
PF3D7_0304300b | 1429 | 0 | 0 | 0 | Yes | Yes |
PF3D7_0405500b | 224 | 0 | 0 | 1 | Yes | Yes |
PF3D7_0506200b | 327 | 0 | 0 | 0 | Yes | Yes |
PF3D7_1026400c | 603 | 0 | 0 | 0 | Yes | No |
aProtective in both models
bProtective in one model
cProtective in neither model
CSP as a positive control.