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. 2016 Jul 20;11(7):e0159407. doi: 10.1371/journal.pone.0159407

Fig 6. UniGenes involved in lignin biosynthesis in wood forming tissues of N. cadamba.

Fig 6

Phenylalanine, intermediates and monolignols are shown in black, while the proteins (enzymes) involved in each step are shown in blue. Detailed protein names, annotation and RNA-Seq expression data are provided in S13 File. * indicates the DEGs. Yellow-blue scale and white-red scale indicate relative and absolute expression profiles, respectively. A, apical stem segment; M, middle stem segment; B, basal stem segment. Absolute expression level (RPKM) is only shown for basal stem segment. 4CL, 4-coumarate: CoA ligase; C3H, p-coumarate 3-hydroxylase; C4H, cinnamate 4-hydroxylase; CAD, cinnamyl alcohol dehydrogenase; CCoAOMT, caffeoyl-CoA O-methyltransferase; CCR, cinnamoyl-CoA reductase; COMT, caffeic acid O-methyltransferase; CSE, Caffeoylshikimate esterase; F5H, ferulate 5-hydroxylase; HCT, p-hydroxycinnamoyl-CoA: quinate shikimate p-hydroxycinnamoyltransferase; PAL, phenylalanine ammonia-lyase.