Table 4.
SNP alleles at the significant QTL identified for pod shatter resistance in DH, IF2, and GWAS panel among 18 pod shatter resistant accessions.
| Name | SRI mean | A01 | A06 | A07 | A09 | C02 | C05 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Bn-A01-p10523833 A/G | Bn-A06-p115948 A/G | Bn-A07-p7392457 T/G | Bn-A09-p30171993 A/C | Bn-scaff_15712_6-p214229 A/G | Bn-scaff_17869_1-p1058624 T/G | ||||||||
| Zhongshuang2 | 0.49 | AA | TT | AA | AA | GG | |||||||
| OG3151 | 0.47 | AA | GG | GG | CC | AA | TT | ||||||
| Zhen2609 | 0.46 | AA | CC | AA | GG | ||||||||
| R1 | 0.45 | AA | TT | CC | AA | GG | |||||||
| OG3237 | 0.44 | AA | GG | GG | CC | AA | TT | ||||||
| 9905 | 0.43 | GG | AA | CC | GG | GG | |||||||
| OG3190 | 0.41 | GG | AA | GG | |||||||||
| HX0352 | 0.39 | GG | GG | TT | |||||||||
| L229 | 0.38 | AA | GG | GG | GG | ||||||||
| 1055B | 0.35 | AA | GG | AA | AA | GG | |||||||
| 9490 | 0.35 | GG | AA | GG | CC | AA | GG | ||||||
| 9230 | 0.34 | AA | AA | GG | CC | AA | GG | ||||||
| 9226 | 0.31 | GG | AA | GG | CC | AA | GG | ||||||
| Zhongshuang11 | 0.31 | AA | TT | CC | AA | GG | |||||||
| L233 | 0.29 | AA | GG | AA | TT | ||||||||
| Huyou19 | 0.29 | GG | CC | AA | TT | ||||||||
| Fan189 | 0.28 | GG | AC | AA | GG | ||||||||
| OG3186 | 0.28 | GG | AA | GG | |||||||||
| R2 | 0.04 | AA | GG | GG | AA | GG | TT | ||||||