Table 1.
Statistics of the reads from MeDIP-Seq, RNA-seq, and small RNA-seq of monoploid, diploid, and triploid rice.
| Reads category | MeDIP-seq | RNA-seq | Small RNA-seq | ||||||
|---|---|---|---|---|---|---|---|---|---|
| 1N | 2N | 3N | 1N | 2N | 3N | 1N | 2N | 3N | |
| Raw reads | 48.98M | 48.98M | 48.98M | 8.08 M | 8.19M | 7.86M | 7.21M | 7.11M | 6.20M |
| Mapped reads | 42.16M (86.1%) | 42.26M (86.3%) | 42.17M (86.1%) | 4.34M (53.8%) | 4.21M (51.5%) | 4.50M (57.2%) | 5.00M (69.2%) | 5.18M (72.8%) | 4.37M (70.5%) |
| Uniquely mapped | 21.33M (50.6%) | 21.34M (50.5%) | 21.64M (51.3%) | 3.53M (81.3%) | 3.50M (83.1%) | 3.63M (80.7%) | 1.50M (30.0%) | 1.13M (21.8%) | 1.21M (27.7%) |
M, million.