Table 1.
Association between gene expression patterns and overall survival in IBC patients.
| Probe | Symbol | p-value | HR | Sctest p-value | Cox HR |
|---|---|---|---|---|---|
| 226914_at | ARPC5L | 4.00E-04 | 1.8 | 4.42E-04 | 1.8 |
| 219366_at | AVEN | 1.90E-03 | 1.5 | 1.03E-03 | 1.5 |
| 236331_at | CDKL2 | 1.50E-03 | 1.5 | 1.20E-03 | 1.5 |
| 226372_at | CHST11 | 0.00E+00 | 2.4 | 7.88E-05 | 2.4 |
| 32094_at | CHST3 | 7.00E-04 | 1.5 | 5.84E-04 | 1.5 |
| 229779_at | COL4A4 | 9.00E-04 | 1.6 | 7.82E-04 | 1.6 |
| 213274_s_at | CTSB | 6.00E-04 | 1.6 | 4.63E-04 | 1.6 |
| 200825_s_at | HYOU1 | 1.00E-04 | 1.7 | 1.99E-04 | 1.7 |
| 213093_at | PRKCA | 1.00E-03 | 1.6 | 6.56E-04 | 1.6 |
| 209325_s_at | RGS16 | 1.00E-03 | 1.6 | 6.26E-04 | 1.6 |
| 212701_at | TLN2 | 5.00E-04 | 1.6 | 5.25E-04 | 1.6 |
| 201645_at | TNC | 1.50E-03 | 1.7 | 9.01E-04 | 1.7 |
*
The complete list of the 45 genes associated with OS is presented in the supplemental data.
**
The HR and p-value is computed based on the permutation resampling inference test for survival data. The “sctest p-value” and “cox HR” columns are based on the log rank test.