Fig 5. SSR genetic linkage maps of homoeologous group 3 chromosomes showing markers-trait associations (markers associated with different traits are shown by solid circles with different colours), black bar given below the solid circle represents that MTA qualified FDR criterion; markers are indicated to the right and map distances (cM) are indicated to the left of the vertical bar (based on the consensus linkage map of Somers et al. [76].

MTAs identified through all three approaches (SLST, MLMM and MTMM) are highlighted with pink.