Table 1. Genes located on Diospyros chloroplast genomes.
Category | Gene name |
---|---|
Ribosomal RNAs | rrn16(2), 23(2), 4.5(2), 5(2) |
Transfer RNAs | *trnA-UGC(2), C-GCA, D-GUC, E-UUC, F-GAA, *G-GCC, G-UCC, H-GUG, I-CAU(2), *I-GAU(2), *K-UUU, L-CAA(2), *L-UAA, L-UAG, M-CAU, N-GUU(2), P-UGG, P-GGG, Q-UUG, R-UCU, R-ACG(2), S-UGA, S-GCU, S-GGA, T-GGU, T-UGU, V-GAC(2), *V-UAC, W-CCA, Y-GUA, fM-CAU |
Proteins of the small ribosomal subunit | rps2, 3, 4, 7(2), 8, 11, *12(2), 14, 15, *16, 18, 19 |
Proteins of the large ribosomal subunit | *rpl2(2), 14, *16, 20, 22, 23(2), 32, 33, 36 |
Subunits of RNA polymerase | rpoA, B, *C1, C2 |
Subunits of NADH- dehydrogenase | *ndhA, *B(2), C, D, E, F, G, H, I, J, K |
Subunits of Photosystem I | psaA, B, C, I, J |
Subunits of Photosystem II | psbA, B, C, D, E, F, H, I, J, K, L, M, N, T, Z |
Large subunit of Rubisco | rbcL |
Subunits of cytochrome b/f complex | petA, *B, *D, G, L, N |
Subunits of ATP synthase | atpA, B, E, *F, H, I |
Acetyl-CoA carboxylase | accD |
Cytochrome c biogenesis | ccsA |
Maturase | matK |
Protease | **clpP |
Envelope membrane protein | cemA |
Conserved hypothetical chloroplast reading frames | ycf1(2), 2(2), **3, 4, 15(2) |
Translation initiation factor | infA |
(2) indicates genes that have undergone duplication. * and ** indicate genes containing one and two introns, respectively.