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. 2016 Jul 21;11(7):e0159566. doi: 10.1371/journal.pone.0159566

Table 1. Genes located on Diospyros chloroplast genomes.

Category Gene name
Ribosomal RNAs rrn16(2), 23(2), 4.5(2), 5(2)
Transfer RNAs *trnA-UGC(2), C-GCA, D-GUC, E-UUC, F-GAA, *G-GCC, G-UCC, H-GUG, I-CAU(2), *I-GAU(2), *K-UUU, L-CAA(2), *L-UAA, L-UAG, M-CAU, N-GUU(2), P-UGG, P-GGG, Q-UUG, R-UCU, R-ACG(2), S-UGA, S-GCU, S-GGA, T-GGU, T-UGU, V-GAC(2), *V-UAC, W-CCA, Y-GUA, fM-CAU
Proteins of the small ribosomal subunit rps2, 3, 4, 7(2), 8, 11, *12(2), 14, 15, *16, 18, 19
Proteins of the large ribosomal subunit *rpl2(2), 14, *16, 20, 22, 23(2), 32, 33, 36
Subunits of RNA polymerase rpoA, B, *C1, C2
Subunits of NADH- dehydrogenase *ndhA, *B(2), C, D, E, F, G, H, I, J, K
Subunits of Photosystem I psaA, B, C, I, J
Subunits of Photosystem II psbA, B, C, D, E, F, H, I, J, K, L, M, N, T, Z
Large subunit of Rubisco rbcL
Subunits of cytochrome b/f complex petA, *B, *D, G, L, N
Subunits of ATP synthase atpA, B, E, *F, H, I
Acetyl-CoA carboxylase accD
Cytochrome c biogenesis ccsA
Maturase matK
Protease **clpP
Envelope membrane protein cemA
Conserved hypothetical chloroplast reading frames ycf1(2), 2(2), **3, 4, 15(2)
Translation initiation factor infA

(2) indicates genes that have undergone duplication. * and ** indicate genes containing one and two introns, respectively.