Table 4. Barley haplotype scoring from six SNPs and one indel in the intron 1 and exon 2 of Vrn-H3 gene.
Cultivar/accession | Position in intron 1 | in Exon 2 | Accession Number | ||||||
---|---|---|---|---|---|---|---|---|---|
63 | 80 | 270 | 302 | 326a | 384 | 36 | Allele b | ||
Triumph | T | C | T | A | in | C | C | Vrn-H3 | DQ898520 |
Strider | C | C | A | A | in | G | C | vrn-H3 | EU007830 |
Cheri | C | C | T | A | in | C | C | Vrn-H3 | This study |
ICB181160 | C | T | A | T | del | G | T | vrn-H3 | This study |
a “in” and “del” refers a 4 bp indel GCTC.
b Alleles linked with early and late heading respectively entitled as “Vrn-H3” from Cheri and “vrn-H3” from ICB181160.