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. 2016 Jul 22;7:1138. doi: 10.3389/fmicb.2016.01138

Table 1.

Metadata Associated with 17 L. monocytogenes strains from Shanghai, China.

Strain Serotype Lineage Year Sources Contigs N50 size STs
SHL001 1/2a II 2007 Human# 33 476,844 381
SHL004 1/2a II 2008 Human 18 579,300 8
SHL005 1/2a II 2008 Human 17 437,049 7
SHL009 1/2a II 2012 Human* 32 541,739 91
SHL011 1/2a II 2011 Human 17 543,519 29
SHL013 1/2a II 2012 Human* 20 358,858 391
SHL002 1/2b I 2007 Human 22 476,844 3
SHL007 1/2b I 2011 Human 43 355,359 87
SHL008 1/2b I 2012 Human 26 293,078 3
SHL010 1/2b I 2012 Human 84 259,950 2
SHL012 1/2b I 2010 Human# 23 355,398 87
SHL006 1/2c II 2010 Human 30 476,139 9
SHL015 1/2a II 2008 Beef 15 425,029 8
SHL017 1/2a II 2004 Bean 17 726,747 381
SHL014 1/2c II 2008 Pork 23 477,674 9
SHL016 1/2c II 2008 Fish 17 512,641 9
SHL018 1/2c II 2004 Vegetables 18 429,471 9
#

Cerebrospinal fluid; all other clinical strains were isolated from blood.

*

The host of these strains died.