Table 3.
LD-regions that are captured by the top SNPs in our study.
| SNP | Chromosome | Region | Length (kb) | Gene(s) | eQTL |
|---|---|---|---|---|---|
| rs11716445 | 3 | 48446237.50387873 | 1941.64 | PLXNB1;…NPRL2 | – |
| rs2705462 | 4 | 156557255.156603882 | 46.63 | GUCY1A3 | – |
| rs477897 | 4 | 168980017.169310018 | 330.00 | ANXA10; DDX60; DDX60L | – |
| rs2285084 | 4 | 2836195.2961783 | 125.59 | SH3BP2; ADD1; MFSD10; NOP14 | – |
| rs1866863 | 6 | 13298395.13352581 | 54.19 | TBC1D7 | 1.7e-10 (rs499818) |
| rs17531553 | 7 | 10255806.10359733 | 103.93 | – | – |
| rs7858600 | 9 | 105517266.105544614 | 27.35 | – | – |
| rs1007021 | 9 | 2699874.2758034 | 58.16 | KCNV2 | – |
| rs1896373 | 10 | 54068904.54116478 | 47.58 | DKK1 | 2.18e-05 (rs1919459) |
| rs1650137 | 12 | 104977289.105016971 | 39.68 | CHST11 | – |
| rs7336083 | 13 | 85893863.86186202 | 292.34 | – | – |
| rs7203818 | 16 | 49637407.49658524 | 21.12 | ZNF423 | – |
| rs4789936 | 17 | 76894415.76928600 | 34.19 | TIMP2; LOC100653515 | – |
| rs2246417 | 21 | 46744358.46760648 | 16.29 | – | – |
Regions that are in linkage disequilibrium with the top SNPs, along with the range of genes residing in those regions and any linked known eQTLs. Genomic coordinates are in reference to the GRCh37 assembly.