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. 2016 Jul 22;7:1151. doi: 10.3389/fmicb.2016.01151

Table 2.

Nucleotide and amino acid sequence similarity (in percentage)a of the putative cold shock proteins of Yersinia pseudotuberculosis strain IP32953.

Gene nameb yptb1088 yptb1392 yptb1423 yptb1624 yptb2414 yptb2950 yptb3585 yptb3586 yptb3587
yptb1088 (210 bp) 46.27 53.62 84.06 79.71 66.67 73.91 73.91 72.46
yptb1392 (264 bp) 57.84 32.84 46.27 47.76 49.25 46.27 46.27 47.76
yptb1423 (210 bp) 60.00 44.61 49.28 49.28 47.83 49.28 49.28 47.83
yptb1624 (210 bp) 75.24 53.92 58.10 82.61 75.36 73.91 73.91 72.46
yptb2414 (213 bp) 71.43 52.94 57.62 84.76 74.29 78.57 78.57 77.14
yptb2950 (213 bp) 64.76 56.37 51.90 72.86 70.42 92.86 92.86 88.57
yptb3585 (213 bp) 66.67 56.37 54.76 73.33 80.75 84.04 100.00 95.71
yptb3586 (213 bp) 67.14 56.37 55.24 72.86 80.28 83.57 99.53 95.71
yptb3587 (213 bp) 66.67 57.35 53.81 72.86 79.34 83.10 95.77 96.24

aTranslated amino acid sequence comparisons above the diagonal and nucleotide sequence comparisons below the diagonal. Alignments were calculated using Clustal Omega v.1.2.1. Nucleotide and amino acid sequences were derived from The Kyoto Encyclopedia of Genes and Genomes (Kanehisa et al., 2016). bGene length in parentheses.