Table 1. The statistics of the features of the Nelumbo nucifera mitochondrial genome.
Category | Feature | Number | bp (%) |
---|---|---|---|
genome (524,797 bp) | G + C | 252,718 (48.16) | |
Genes (total) | |||
protein coding1 | 43 | 35651 (6.8) | |
pseudogenes | 9 | 5541 (1.1) | |
rRNA2 | 6 | 11407 (2.2) | |
mt-derived tRNA | 13 | 1054 (0.2) | |
cp-derived tRNA | 7 | 506 (0.1) | |
ORF | 96 | 38062 (7.3) | |
Introns | |||
cis-spliced | 20 | 39780 (7.6) | |
trans-spliced | 5 | n.a | |
Repeats | |||
Repeats(>500) | 8 | 48898 (9.3) | |
Short Repeats(20<, <500) | 191 | 16668 (3.2) | |
SSRs | 201 | 2628 (0.5) |
1Each of gene ccmFN, rps19 and sdh3 has two copies.
2Each of the three ribosome RNAs (rrn26, rrn18, rrn5) has two copies.