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. 2016 Jul 2;8:836–850. doi: 10.1016/j.dib.2016.06.051

Table 1.

Differentially expressed genes in Aminaphtone-treated vs. untreated IL-1β-stimulated ECV304 endothelial cells.

Symbol Gene name Gene ID FDR Ptreatment Pinteraction FC AMNA/IL-1β
Pairwise
FC 1 h FC 3 h FC 6 h 1 h 3 h 6 h
AAK1 AP2 associated kinase 1 22848 9.13e-02 5.98e-03 7.26e-01 1.55 1.66 1.31 *
ACAP1 ArfGAP with coiled-coil, ankyrin repeat and PH domains 1 9744 1.65e-02 2.07e-04 4.01e-01 −1.50 −1.23 −1.36 ** *
AGAP2 ArfGAP with GTPase domain, ankyrin repeat and PH domain 2 116986 1.73e-03 8.86e-05 4.53e-01 −1.39 −1.58 −1.31 ** ** *
AK4 adenylate kinase 4 205 8.79e-03 4.27e-01 7.56e-04 1.41 −1.01 −1.64 * **
ANKRD1 ankyrin repeat domain 1 (cardiac muscle) 27063 8.02e-03 2.75e-02 1.23e-02 1.26 −1.46 −1.78 * **
ANKRD13A ankyrin repeat domain 13A 88455 8.98e-02 2.37e-04 1.88e-01 1.23 1.47 1.18 * **
ANXA3 annexin A3 306 4.39e-04 7.76e-02 7.05e-04 1.48 −1.33 −1.70 ** * **
AREG amphiregulin 374 7.88e-02 6.01e-03 6.32e-01 −1.37 −1.39 −1.78 *
ARHGEF26 Rho guanine nucleotide exchange factor (GEF) 26 26084 7.10e-02 1.36e-03 9.35e-01 1.42 1.33 1.42 * *
ARL4C ADP-ribosylation factor-like 4C 10123 2.31e-02 2.22e-04 8.41e-01 −1.41 −1.30 −1.39 ** **
ATF7IP2 activating transcription factor 7 interacting protein 2 80063 5.87e-02 5.59e-03 1.69e-01 1.77 1.17 1.22 **
BCL2L11 BCL2-like 11 (apoptosis facilitator) 10018 8.59e-04 7.06e-05 3.23e-02 1.60 1.48 1.09 ** ** *
BCL3 B-cell CLL/lymphoma 3 602 4.12e-03 3.18e-02 5.00e-03 −1.98 −1.05 1.13 **
BMP6 bone morphogenetic protein 6 654 1.78e-02 3.25e-03 6.12e-02 −1.00 1.65 1.47 ** *
BNIP3 BCL2/adenovirus E1B 19 kDa interacting protein 3 664 0.00e+00 3.64e-05 4.09e-06 1.11 −1.12 −2.54 **
BRCA1 breast cancer 1, early onset 672 7.46e-02 4.42e-01 1.64e-02 1.96 −1.28 −1.15 **
BUB1 BUB1 mitotic checkpoint serine/threonine kinase 699 1.40e-02 5.76e-01 5.38e-03 1.93 −1.28 −1.26 **
BUB1B BUB1 mitotic checkpoint serine/threonine kinase B 701 5.11e-02 4.12e-01 1.69e-02 2.09 −1.32 −1.14 **
C14orf105 chromosome 14 open reading frame 105 55195 6.13e-02 4.75e-03 5.28e-01 −1.22 −1.59 −1.62 * *
C15orf48 chromosome 15 open reading frame 48 84419 5.83e-03 7.16e-05 4.51e-02 −1.61 −1.17 −1.25 ** *
C1orf63 chromosome 1 open reading frame 63 57035 3.07e-03 1.82e-04 3.43e-01 1.61 1.27 1.38 ** *
C2orf44 chromosome 2 open reading frame 44 80304 9.87e-03 1.63e-03 2.02e-01 1.79 1.35 1.20 **
C3orf58 chromosome 3 open reading frame 58 205428 1.08e-05 3.22e-01 1.35e-06 1.54 1.17 −1.61 ** * **
C7orf53 chromosome 7 open reading frame 53 286006 6.37e-05 1.06e-03 1.05e-02 2.19 1.05 1.27 **
C9orf131 chromosome 9 open reading frame 131 138724 9.82e-03 4.39e-04 7.67e-02 1.67 1.21 1.19 **
CACHD1 cache domain containing 1 57685 4.66e-02 2.02e-03 4.84e-01 1.31 1.63 1.29 **
CBLB Cbl proto-oncogene, E3 ubiquitin protein ligase B 868 8.71e-02 1.29e-02 2.19e-01 1.07 1.86 1.45 *
CCL22 chemokine (C–C motif) ligand 22 6367 0.00e+00 6.98e-06 6.53e-02 −1.36 −2.20 −1.99 * ** **
CD70 CD70 molecule 970 9.39e-02 1.09e-03 2.37e-01 −1.53 −1.22 −1.20 **
CD83 CD83 molecule 9308 1.63e-03 4.10e-04 8.35e-02 1.80 1.22 1.27 **
CEBPD CCAAT/enhancer binding protein (C/EBP), delta 1052 6.06e-03 4.58e-01 6.34e-04 −1.70 1.12 1.31 ** *
CENPF centromere protein F, 350/400 kDa 1063 8.68e-02 6.92e-01 2.45e-02 1.90 −1.75 −1.31 *
CEP55 centrosomal protein 55 kDa 55165 4.42e-02 7.14e-01 8.10e-03 1.68 −1.40 −1.35 *
CEP76 centrosomal protein 76 kDa 79959 7.67e-02 2.29e-03 1.52e-01 1.57 1.32 1.09 ** *
CHCHD7 coiled-coil-helix-coiled-coil-helix domain containing 7 79145 6.62e-02 3.19e-03 4.05e-01 1.58 1.47 1.17 * *
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 10370 7.93e-02 2.38e-01 3.69e-03 −1.38 1.47 1.22 * **
CKAP2L cytoskeleton associated protein 2-like 150468 1.53e-02 1.45e-01 1.89e-02 1.57 −1.97 −1.57 *
CLEC4E C-type lectin domain family 4, member E 26253 4.03e-03 8.42e-04 3.66e-01 −1.25 −1.53 −1.71 * **
CNNM4 cyclin M4 26504 1.79e-07 9.46e-05 4.77e-04 −1.11 2.00 1.57 ** **
CSF2 colony stimulating factor 2 (granulocyte-macrophage) 1437 1.02e-03 8.79e-04 7.21e-01 −1.68 −1.88 −1.48 * **
CTH cystathionase (cystathionine gamma-lyase) 1491 6.66e-03 1.90e-04 3.46e-01 1.29 1.59 1.31 * ** *
CTSK cathepsin K 1513 2.91e-03 4.28e-04 9.47e-01 1.54 1.53 1.45 * * *
CUZD1 CUB and zona pellucida-like domains 1 50624 7.05e-02 3.72e-02 4.52e-02 1.95 1.02 1.05 **
CX3CL1 chemokine (C-X3-C motif) ligand 1 6376 1.25e-02 3.11e-03 4.58e-01 −1.94 −1.48 −1.33 **
CXCL3 chemokine (C-X-C motif) ligand 3 2921 8.34e-02 1.65e-02 5.71e-02 −1.70 −1.34 1.07 **
CXCL6 chemokine (C-X-C motif) ligand 6 6372 2.85e-03 1.69e-04 6.11e-01 −1.39 −1.34 −1.58 * * **
CYB5D1 cytochrome b5 domain containing 1 124637 2.40e-03 1.21e-03 7.39e-02 1.78 1.50 1.07 ** *
CYP24A1 cytochrome P450, family 24, subfamily A, polypeptide 1 1591 2.62e-05 4.54e-05 7.89e-01 −1.52 −1.69 −1.51 ** ** **
DBR1 debranching enzyme homolog 1 (Saccharomyces cerevisiae) 51163 7.97e-02 1.06e-03 4.21e-01 1.52 1.26 1.24 **
DDIT4 DNA-damage-inducible transcript 4 54541 5.57e-04 5.87e-04 5.05e-01 −1.90 −1.40 −1.57 ** *
DDR1 discoidin domain receptor tyrosine kinase 1 780 1.43e-02 1.48e-03 8.30e-02 −1.73 −1.26 −1.13 **
DENND2C DENN/MADD domain containing 2C 163259 3.14e-02 1.33e-03 9.57e-01 1.44 1.49 1.40 * * *
DEPDC1 DEP domain containing 1 55635 5.44e-02 9.05e-01 1.02e-02 1.75 −1.26 −1.44 *
DKK1 dickkopf 1 homolog (Xenopus laevis) 22943 2.94e-05 5.83e-05 1.71e-02 −1.25 −1.25 −1.94 **
DLEU1 deleted in lymphocytic leukemia 1 (non-protein coding) 10301 7.23e-02 5.02e-03 1.27e-01 1.71 1.19 1.14 **
DLGAP5 discs, large (Drosophila) homolog-associated protein 5 9787 4.29e-03 1.58e-01 2.80e-03 1.51 −1.58 −1.42 * * *
DNAJB1 DnaJ (Hsp40) homolog, subfamily B, member 1 3337 1.36e-02 4.99e-03 4.35e-02 1.82 1.31 1.00 **
DUSP8 dual specificity phosphatase 8 1850 5.16e-03 1.05e-02 4.26e-03 −1.87 1.06 −1.07 **
EBI3 Epstein-Barr virus induced 3 10148 0.00e+00 6.30e-06 6.87e-01 −1.82 −1.73 −2.06 ** ** **
ECT2 epithelial cell transforming sequence 2 oncogene 1894 6.84e-03 5.43e-02 1.07e-02 1.36 −1.84 −1.45 **
EDN1 endothelin 1 1906 0.00e+00 2.33e-06 8.60e-01 −1.79 −1.93 −1.97 ** ** **
EFNA1 ephrin-A1 1942 4.91e-03 1.20e-03 2.03e-02 −1.74 −1.02 −1.31 ** *
EFNB2 ephrin-B2 1948 1.76e-02 3.27e-03 1.81e-01 1.81 1.40 1.13 **
EGR2 early growth response 2 1959 7.52e-03 3.57e-03 6.43e-03 −1.80 −1.04 −1.06 **
EIF4B eukaryotic translation initiation factor 4B 1975 3.63e-02 4.03e-01 9.48e-03 1.56 −1.22 −1.69 * *
EIF4EBP2 eukaryotic translation initiation factor 4E binding protein 2 1979 3.09e-04 5.53e-06 1.55e-01 1.25 1.56 1.42 * ** **
ELF3 E74-like factor 3 (ets domain transcription factor, epithelial-specific ) 1999 6.05e-02 3.62e-02 8.45e-03 −1.24 1.43 1.43 * *
ELMSAN1 ELM2 and Myb/SANT-like domain containing 1 91748 3.96e-05 1.34e-02 1.00e-05 −1.86 1.19 1.08 ** *
ELOVL4 ELOVL fatty acid elongase 4 6785 8.64e-03 5.29e-04 3.98e-01 1.40 1.62 1.25 * **
ELOVL6 ELOVL fatty acid elongase 6 79071 7.35e-02 1.86e-01 1.29e-02 1.84 −1.08 −1.15 **
ENO2 enolase 2 (gamma, neuronal) 2026 6.53e-05 1.50e-03 1.22e-02 −1.27 −1.06 −2.31 **
ERCC6L excision repair cross-complementing rodent repair deficiency, complementation group 6-like 54821 6.72e-02 8.17e-01 1.39e-02 1.75 −1.58 −1.21 *
ERF Ets2 repressor factor 2077 1.91e-02 4.84e-04 1.05e-01 −1.62 −1.22 −1.19 **
EVA1A eva-1 homolog A (Caenorhabditis elegans) 84141 1.25e-06 3.14e-07 4.49e-03 −1.19 −1.47 −1.74 * ** **
FAM102A family with sequence similarity 102, member A 399665 3.29e-02 6.69e-02 5.48e-03 −1.32 1.41 1.48 * *
FAM111B family with sequence similarity 111, member B 374393 7.05e-02 5.89e-01 2.31e-02 2.18 −1.58 −1.06 *
FAM46C family with sequence similarity 46, member C 54855 5.99e-04 5.82e-04 4.90e-03 1.87 1.20 1.03 **
FAM72D family with sequence similarity 72, member D 728833 2.54e-04 4.65e-01 1.25e-03 1.86 −1.60 −1.46 ** * *
FBLIM1 filamin binding LIM protein 1 54751 1.21e-03 1.31e-04 5.98e-01 −1.61 −1.38 −1.39 ** * *
FBXL20 F-box and leucine-rich repeat protein 20 84961 1.87e-04 2.46e-04 6.47e-02 1.19 1.91 1.40 ** *
FBXO33 F-box protein 33 254170 4.21e-02 9.72e-04 7.70e-02 1.22 1.62 1.13 **
FLJ36840 uncharacterized LOC645524 645524 2.12e-02 1.52e-01 2.64e-02 2.66 −1.34 1.09 **
FOS FBJ murine osteosarcoma viral oncogene homolog 2353 4.65e-06 4.26e-04 3.84e-04 2.13 1.01 1.08 **
FRMD6 FERM domain containing 6 122786 4.02e-02 1.16e-02 3.29e-02 1.11 −1.49 −1.57 * **
FRMD8 FERM domain containing 8 83786 3.02e-02 6.15e-03 2.25e-02 −1.72 −1.23 1.03 **
FST follistatin 10468 7.49e-02 1.12e-03 1.27e-01 −1.07 −1.44 −1.42 ** **
FUT11 fucosyltransferase 11 (alpha (1,3) fucosyltransferase) 170384 5.23e-02 1.79e-03 6.02e-03 −1.14 1.00 −1.62 **
GAN gigaxonin 8139 4.82e-02 6.57e-03 1.16e-01 1.80 1.22 1.12 **
GAREM GRB2 associated, regulator of MAPK1 64762 9.44e-02 1.61e-03 1.88e-02 −1.00 1.54 1.23 ** *
GAS2L3 growth arrest-specific 2 like 3 283431 5.77e-02 2.78e-01 1.30e-02 1.92 −1.14 −1.17 **
GCLC glutamate-cysteine ligase, catalytic subunit 2729 3.29e-02 2.08e-03 7.58e-01 1.56 1.53 1.32 * *
GCLM glutamate–cysteine ligase, modifier subunit 2730 1.37e-02 1.51e-03 5.69e-01 1.71 1.40 1.35 **
GLCCI1 glucocorticoid induced transcript 1 113263 2.69e-02 1.03e-04 8.16e-01 1.37 1.38 1.28 ** **
GPR56 G protein-coupled receptor 56 9289 1.49e-02 3.94e-03 7.47e-02 −1.85 −1.09 −1.27 **
GPR89A G protein-coupled receptor 89A 653519 5.78e-02 3.12e-03 3.52e-01 1.67 1.32 1.22 **
GRB7 growth factor receptor-bound protein 7 2886 1.09e-02 1.07e-03 5.88e-02 −1.74 −1.18 −1.18 **
GTF2B general transcription factor IIB 2959 6.15e-04 8.75e-05 1.99e-01 1.69 1.35 1.29 ** * *
HCAR1 hydroxycarboxylic acid receptor 1 27198 9.99e-02 3.02e-03 7.95e-01 −1.29 −1.45 −1.49 * *
HILPDA hypoxia inducible lipid droplet-associated 29923 7.25e-05 9.73e-04 3.21e-03 −1.20 −1.01 −2.09 **
HIST1H2AK histone cluster 1, H2ak 8330 3.09e-03 2.95e-03 1.11e-01 −1.05 −1.71 −1.85 * **
HIST2H2BF histone cluster 2, H2bf 440689 4.80e-03 4.43e-05 6.62e-01 1.36 1.32 1.47 ** * **
HIST2H4A histone cluster 2, H4a 8370 0.00e+00 4.91e-07 1.85e-02 1.87 1.46 1.32 ** ** **
HK2 hexokinase 2 3099 1.25e-06 4.59e-04 1.65e-03 1.06 −1.37 −2.25 * **
HMMR hyaluronan-mediated motility receptor (RHAMM) 3161 1.23e-02 2.21e-01 8.49e-03 1.58 −1.43 −1.71 * *
HMOX1 heme oxygenase (decycling) 1 3162 1.69e-02 3.20e-04 3.02e-01 −1.51 −1.19 −1.41 ** **
ID2 inhibitor of DNA binding 2, dominant negative helix-loop-helix protein 3398 5.45e-03 1.51e-04 1.15e-02 1.38 1.58 1.03 ** **
IDI1 isopentenyl-diphosphate delta isomerase 1 3422 6.89e-02 4.10e-03 2.47e-01 1.70 1.21 1.23 **
IGFL1 IGF-like family member 1 374918 0.00e+00 1.06e-05 8.05e-01 −2.11 −2.05 −2.41 ** ** **
IL1B interleukin 1, beta 3553 2.12e-03 1.50e-03 3.88e-01 −1.29 −1.92 −1.69 ** *
IL32 interleukin 32 9235 3.56e-03 8.70e-05 1.94e-01 −1.23 −1.34 −1.59 ** **
IL7R interleukin 7 receptor 3575 2.09e-04 7.60e-04 8.60e-02 −1.11 −1.95 −1.69 ** **
IRF2BP2 interferon regulatory factor 2 binding protein 2 359948 1.26e-02 7.17e-02 2.00e-04 −1.65 1.11 1.13 **
ISCA1 iron–sulfur cluster assembly 1 homolog (S. cerevisiae) 81689 2.42e-02 2.41e-03 1.97e-01 1.60 1.54 1.10 ** *
ISG20L2 interferon stimulated exonuclease gene 20 kDa-like 2 81875 8.45e-02 4.01e-02 2.40e-03 −1.62 1.08 1.03 **
KCTD11 potassium channel tetramerisation domain containing 11 147040 4.26e-05 1.92e-04 3.55e-01 −1.91 −1.36 −1.65 ** **
KDELC1 KDEL (Lys-Asp-Glu-Leu) containing 1 79070 5.23e-02 7.58e-05 3.32e-01 1.20 1.43 1.30 ** **
KHDRBS3 KH domain containing, RNA binding, signal transduction associated 3 10656 1.79e-03 2.61e-06 7.74e-04 1.05 1.57 1.32 ** **
KIAA0922 KIAA0922 23240 1.60e-02 1.12e-03 3.47e-01 1.25 1.68 1.35 **
KIAA1524 KIAA1524 57650 2.09e-02 3.06e-01 1.10e-02 1.64 −1.68 −1.44 * *
KIF14 kinesin family member 14 9928 1.42e-02 8.55e-01 1.29e-02 2.46 −1.70 −1.31 *
KIF23 kinesin family member 23 9493 7.31e-02 1.00e+00 1.64e-02 1.88 −1.46 −1.29 *
KLRAP1 killer cell lectin-like receptor subfamily A pseudogene 1 10748 9.99e-02 9.35e-01 2.08e-02 1.86 −1.58 −1.22 *
KRT16 keratin 16 3868 8.89e-04 7.06e-04 5.60e-01 −1.73 −1.76 −1.37 * **
KRT17 keratin 17 3872 1.35e-03 6.95e-04 2.03e-01 −1.86 −1.24 −1.43 ** *
KRT34 keratin 34 3885 6.82e-02 5.18e-04 8.08e-01 −1.27 −1.37 −1.40 **
LAMB3 laminin, beta 3 3914 9.31e-03 7.05e-04 8.37e-01 −1.57 −1.44 −1.39 ** * *
LIF leukemia inhibitory factor 3976 1.04e-03 1.87e-02 1.93e-03 −1.34 1.51 1.62 * ** **
LMCD1 LIM and cysteine-rich domains 1 29995 7.13e-02 2.87e-04 8.53e-01 −1.38 −1.33 −1.28 **
LOC100130713 uncharacterized LOC100130713 100130713 8.73e-03 3.78e-02 1.06e-03 −1.33 1.51 1.34 * ** *
LOC440896 uncharacterized LOC440896 440896 1.04e-02 7.89e-04 8.40e-01 −1.55 −1.49 −1.37 * *
LOX lysyl oxidase 4015 2.52e-02 2.34e-04 3.94e-02 −1.15 −1.19 −1.60 **
LPIN1 lipin 1 23175 1.40e-03 2.40e-04 4.71e-02 1.72 1.37 1.12 ** *
MARCH8 membrane-associated ring finger (C3HC4) 8, E3 ubiquitin protein ligase 220972 7.20e-02 2.41e-03 2.60e-01 1.12 1.54 1.42 ** *
MEF2D myocyte enhancer factor 2D 4209 4.21e-03 9.11e-02 1.55e-03 −1.84 1.24 −1.00 **
MEGF9 multiple EGF-like-domains 9 1955 1.01e-04 2.69e-04 9.48e-01 1.62 1.76 1.69 * ** *
MERTK c-mer proto-oncogene tyrosine kinase 10461 6.83e-05 2.96e-05 6.07e-02 1.28 1.79 1.32 * ** *
MINPP1 multiple inositol-polyphosphate phosphatase 1 9562 4.12e-02 2.07e-03 6.87e-01 1.51 1.54 1.28 * *
MIR29A microRNA 29a 407021 6.91e-05 9.06e-04 3.57e-01 1.59 1.74 2.69 **
MKI67 antigen identified by monoclonal antibody Ki-67 4288 2.28e-02 6.57e-01 1.27e-02 2.18 −1.58 −1.13 **
MMP1 matrix metallopeptidase 1 (interstitial collagenase) 4312 1.40e-04 1.11e-03 3.61e-02 −1.08 −1.44 −2.18 * **
MMP10 matrix metallopeptidase 10 (stromelysin 2) 4319 5.96e-08 1.29e-04 1.54e-03 −1.02 −1.38 −2.37 * **
MMP3 matrix metallopeptidase 3 (stromelysin 1, progelatinase) 4314 1.93e-05 1.63e-03 2.51e-02 −1.01 −1.63 −2.57 * * **
MOB3C MOB kinase activator 3C 148932 2.40e-02 1.54e-02 7.70e-03 −1.78 1.01 −1.02 **
MYLIP myosin regulatory light chain interacting protein 29116 0.00e+00 9.67e-07 8.89e-05 2.84 1.52 1.12 ** **
NAV3 neuron navigator 3 89795 7.05e-02 6.46e-01 6.03e-03 1.55 −1.42 −1.24 * *
NCAPG non-SMC condensin I complex, subunit G 64151 8.61e-02 7.39e-01 1.66e-02 1.89 −1.41 −1.18 *
NEK2 NIMA-related kinase 2 4751 5.47e-02 2.39e-01 7.63e-03 1.78 −1.23 −1.04 **
NINJ1 ninjurin 1 4814 6.07e-02 5.10e-03 8.39e-02 −1.70 −1.25 −1.06 **
NIPAL4 NIPA-like domain containing 4 348938 4.83e-03 6.92e-04 3.07e-01 −1.74 −1.31 −1.32 **
NR4A2 nuclear receptor subfamily 4, group A, member 2 4929 2.09e-03 5.30e-01 1.08e-03 −1.85 1.21 1.31 **
NUAK2 NUAK family, SNF1-like kinase, 2 81788 1.41e-02 3.76e-04 1.70e-01 −1.60 −1.19 −1.30 ** *
NXF1 nuclear RNA export factor 1 10482 1.95e-02 4.17e-04 7.68e-02 1.19 1.63 1.20 **
OLFM2 olfactomedin 2 93145 9.51e-02 4.42e-03 7.98e-02 −1.65 −1.13 −1.14 **
OSBPL11 oxysterol binding protein-like 11 114885 9.51e-02 8.43e-03 4.90e-01 1.84 1.30 1.37 *
OXTR oxytocin receptor 5021 1.11e-03 9.51e-06 5.52e-03 −1.10 −1.62 −1.32 ** **
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 5033 1.04e-04 4.09e-01 3.61e-04 1.58 −1.02 −1.89 ** **
PCF11 PCF11, cleavage and polyadenylation factor subunit, homolog (S. cerevisiae) 51585 2.42e-02 3.67e-02 3.25e-02 2.13 −1.01 1.06 **
PDGFB platelet-derived growth factor beta polypeptide 5155 2.00e-04 6.09e-04 9.34e-02 −2.09 −1.26 −1.36 **
PDK1 pyruvate dehydrogenase kinase, isozyme 1 5163 1.91e-06 2.69e-02 4.56e-04 1.44 −1.19 −2.37 * **
PDZK1IP1 PDZK1 interacting protein 1 10158 3.32e-02 2.18e-03 6.99e-02 −1.60 −1.03 −1.39 ** *
PER1 period circadian clock 1 5187 1.43e-02 6.69e-02 3.66e-03 −1.84 1.08 1.08 **
PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 5210 0.00e+00 3.32e-04 6.63e-05 −1.06 1.04 −2.67 **
PHLDA3 pleckstrin homology-like domain, family A, member 3 23612 4.60e-02 7.89e-04 5.33e-01 −1.52 −1.27 −1.31 ** *
PIK3R1 phosphoinositide-3-kinase, regulatory subunit 1 (alpha) 5295 2.59e-03 1.84e-02 2.19e-02 2.40 1.14 −1.02 **
PIK3R3 phosphoinositide-3-kinase, regulatory subunit 3 (gamma) 8503 1.86e-02 4.86e-04 5.59e-01 1.28 1.54 1.37 ** *
PLAT plasminogen activator, tissue 5327 3.74e-02 1.90e-02 1.06e-01 −2.20 −1.18 −1.12 **
PLCB4 phospholipase C, beta 4 5332 7.45e-06 3.68e-02 2.37e-03 1.73 −2.07 −2.14 * ** **
PLEKHG2 pleckstrin homology domain containing, family G (with RhoGef domain) member 2 64857 3.71e-02 3.43e-03 7.01e-02 −1.72 −1.23 −1.08 **
PLEKHM1 pleckstrin homology domain containing, family M (with RUN domain) member 1 9842 8.05e-02 9.03e-02 1.43e-02 −1.28 1.65 1.26 **
PLEKHM3 pleckstrin homology domain containing, family M, member 3 389072 3.51e-02 4.36e-03 9.12e-01 1.57 1.78 1.56 *
PODXL podocalyxin-like 5420 1.55e-02 8.88e-04 9.91e-03 −1.05 −1.16 −1.69 **
POLA1 polymerase (DNA directed), alpha 1, catalytic subunit 5422 9.69e-02 3.40e-01 2.19e-02 1.95 −1.35 −1.00 **
PPP1R18 protein phosphatase 1, regulatory subunit 18 170954 2.09e-02 7.61e-03 1.02e-02 −1.77 −1.06 −1.02 **
PPP1R3C protein phosphatase 1, regulatory subunit 3C 5507 1.19e-02 9.34e-03 7.03e-02 1.04 −1.54 −1.94 * **
PRDM1 PR domain containing 1, with ZNF domain 639 0.00e+00 1.29e-05 3.46e-06 −2.47 −1.04 −1.01 **
PRKCA protein kinase C, alpha 5578 3.16e-03 6.04e-04 9.57e-01 1.48 1.59 1.54 * * *
PRSS22 protease, serine, 22 64063 2.23e-02 3.34e-04 8.39e-01 −1.41 −1.43 −1.31 ** **
PTCH1 patched 1 5727 8.87e-02 1.19e-02 6.15e-03 −1.02 1.65 1.04 **
PTP4A3 protein tyrosine phosphatase type IVA, member 3 11156 1.22e-04 2.90e-04 3.74e-01 −1.51 −1.95 −1.41 * **
PXDC1 PX domain containing 1 221749 3.90e-02 3.71e-01 2.02e-03 −1.66 1.16 1.19 **
RAI14 retinoic acid induced 14 26064 9.76e-02 7.26e-01 1.68e-02 1.87 −1.31 −1.26 *
RASD2 RASD family, member 2 23551 6.21e-02 7.34e-04 2.19e-02 −1.58 −1.08 −1.15 **
RASSF5 Ras association (RalGDS/AF-6) domain family member 5 83593 9.60e-02 2.47e-04 6.95e-01 −1.29 −1.39 −1.25 **
RIPK4 receptor-interacting serine–threonine kinase 4 54101 1.33e-03 3.07e-04 1.37e-02 −1.79 −1.10 −1.23 **
RND1 Rho family GTPase 1 27289 9.23e-03 1.56e-02 5.23e-02 −1.12 1.59 2.06 **
RNF103 ring finger protein 103 7844 6.68e-02 2.52e-03 9.20e-01 1.44 1.51 1.37 * *
RRM2 ribonucleotide reductase M2 6241 5.93e-02 3.12e-03 1.19e-02 1.59 1.22 −1.04 **
S100A3 S100 calcium binding protein A3 6274 0.00e+00 7.47e-06 5.36e-02 −2.37 −1.37 −2.05 ** **
SAMD4A sterile alpha motif domain containing 4A 23034 7.19e-04 4.28e-06 7.70e-02 1.22 1.56 1.36 * ** **
SELE selectin E 6401 2.45e-03 2.50e-03 1.08e-02 −1.01 1.24 1.89 **
SEMA4C sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C 54910 9.90e-02 1.27e-03 8.89e-02 −1.53 −1.26 −1.08 ** *
SERPINA3 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 12 2.93e-03 4.08e-03 1.68e-01 −2.38 −1.29 −1.37 **
SERPINB9 serpin peptidase inhibitor, clade B (ovalbumin), member 9 5272 4.70e-02 4.96e-03 1.48e-01 −1.07 −1.39 −1.72 **
SERPINH1 serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1) 871 6.23e-02 1.47e-03 4.28e-01 −1.27 −1.27 −1.58 **
SERPINI1 serpin peptidase inhibitor, clade I (neuroserpin), member 1 5274 2.82e-02 1.25e-03 6.61e-01 1.54 1.28 1.46 * *
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 6513 2.93e-03 1.28e-03 6.12e-02 −1.23 −1.19 −1.91 **
SLC33A1 solute carrier family 33 (acetyl-CoA transporter), member 1 9197 6.24e-02 6.09e-04 3.29e-01 1.42 1.42 1.16 ** **
SLC35D1 solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1 23169 5.29e-02 3.06e-03 6.97e-01 1.65 1.38 1.35 *
SLC6A14 solute carrier family 6 (amino acid transporter), member 14 11254 8.97e-02 5.67e-03 8.88e-02 1.01 −1.46 −1.50 * *
SLC6A8 solute carrier family 6 (neurotransmitter transporter, creatine), member 8 6535 2.16e-03 1.14e-03 1.69e-02 −1.03 1.70 1.47 ** **
SMIM14 small integral membrane protein 14 201895 7.25e-02 3.85e-03 4.08e-01 1.19 1.64 1.41 *
SNHG12 small nucleolar RNA host gene 12 (non-protein coding) 85028 2.55e-04 1.61e-05 6.39e-02 1.66 1.38 1.21 ** ** *
SNORA61 small nucleolar RNA, H/ACA box 61 677838 7.99e-04 6.54e-05 7.40e-02 1.62 1.45 1.15 ** **
SNORD105 small nucleolar RNA, C/D box 105 692229 1.18e-02 5.73e-03 9.15e-02 −1.82 −1.58 −1.00 ** *
SNORD13P2 small nucleolar RNA, C/D box 13 pseudogene 2 6077 1.60e-02 8.33e-02 5.74e-03 −1.88 1.16 1.01 **
SNORD14E small nucleolar RNA, C/D box 14E 85391 1.44e-02 1.01e-02 9.15e-02 2.17 1.21 1.14 **
SNORD22 small nucleolar RNA, C/D box 22 9304 1.49e-06 3.21e-04 3.16e-02 2.57 1.32 1.34 **
SNORD28 small nucleolar RNA, C/D box 28 9300 4.12e-02 1.90e-03 1.47e-01 1.66 1.14 1.26 **
SNORD30 small nucleolar RNA, C/D box 30 9299 1.45e-02 3.29e-03 4.36e-02 1.82 1.11 1.16 **
SNORD31 small nucleolar RNA, C/D box 31 9298 5.13e-06 9.26e-05 3.20e-03 2.08 1.18 1.17 **
SNORD32A small nucleolar RNA, C/D box 32A 26819 6.96e-02 1.74e-02 3.10e-02 −1.66 −1.32 1.11 **
SPRY4 sprouty homolog 4 (Drosophila) 81848 8.04e-02 2.15e-03 1.03e-01 −1.59 −1.09 −1.25 **
SRGN serglycin 5552 1.96e-02 1.14e-04 7.38e-02 −1.15 −1.28 −1.55 * **
STAT5A signal transducer and activator of transcription 5A 6776 8.68e-02 6.33e-04 6.45e-01 −1.22 −1.38 −1.40 **
STC1 stanniocalcin 1 6781 8.00e-04 1.62e-03 1.37e-02 −1.21 −1.06 −2.01 **
STC2 stanniocalcin 2 8614 9.30e-04 1.85e-03 5.42e-03 1.01 −1.19 −1.93 **
STK17B serine/threonine kinase 17b 9262 1.23e-03 1.93e-03 1.18e-01 2.15 1.36 1.23 **
STX4 syntaxin 4 6810 2.28e-03 1.23e-04 9.23e-01 −1.49 −1.40 −1.43 ** * **
SYDE1 synapse defective 1, Rho GTPase, homolog 1 (C. elegans) 85360 9.00e-02 9.80e-04 4.81e-01 −1.43 −1.19 −1.40 ** *
TAGLN transgelin 6876 3.45e-03 3.65e-04 6.89e-01 −1.43 −1.37 −1.61 * * **
TAS2R4 taste receptor, type 2, member 4 50832 9.62e-02 1.10e-02 1.86e-01 1.83 1.15 1.22 **
TFRC transferrin receptor (p90, CD71) 7037 7.32e-02 3.99e-01 2.32e-02 2.18 −1.21 −1.23 **
TGFB1I1 transforming growth factor beta 1 induced transcript 1 7041 8.92e-05 2.58e-05 9.24e-01 −1.47 −1.48 −1.55 ** ** **
TGFB2 transforming growth factor, beta 2 7042 1.50e-05 2.51e-03 3.22e-03 1.19 −2.14 −1.52 ** *
TICAM1 toll-like receptor adaptor molecule 1 148022 4.13e-03 8.38e-03 8.32e-04 −1.79 1.05 1.01 **
TLE1 transducin-like enhancer of split 1 (E(sp1) homolog, Drosophila) 7088 3.37e-03 1.25e-02 3.72e-04 −1.23 1.70 1.14 * **
TM4SF18 transmembrane 4L six family member 18 116441 3.05e-02 6.72e-02 2.10e-03 1.31 −1.24 −1.55 * **
TMEM2 transmembrane protein 2 23670 2.67e-02 5.08e-03 6.27e-01 2.00 1.44 1.53 *
TNFAIP6 tumor necrosis factor, alpha-induced protein 6 7130 1.27e-02 4.06e-03 2.87e-01 −1.16 −1.70 −1.84 * *
TNFRSF11B tumor necrosis factor receptor superfamily, member 11b 4982 6.74e-06 4.09e-04 2.27e-01 −1.49 −2.62 −1.70 ** *
TNFSF18 tumor necrosis factor (ligand) superfamily, member 18 8995 0.00e+00 3.06e-06 3.10e-01 −2.41 −4.24 −3.41 ** ** **
TOP2A topoisomerase (DNA) II alpha 170 kDa 7153 4.62e-02 8.29e-01 1.18e-02 1.90 −1.42 −1.24 **
TRAF1 TNF receptor-associated factor 1 7185 2.49e-04 8.97e-05 2.32e-01 −1.69 −1.50 −1.26 ** **
TRIP6 thyroid hormone receptor interactor 6 7205 8.37e-02 9.63e-04 6.24e-01 −1.48 −1.30 −1.26 ** *
TSGA10 testis specific, 10 80705 6.19e-02 6.67e-03 1.65e-02 1.68 1.07 1.04 **
TTLL3 tubulin tyrosine ligase-like family, member 3 26140 3.38e-03 1.07e-03 1.29e-02 −1.04 1.65 1.45 ** **
UBALD1 UBA-like domain containing 1 124402 1.29e-02 9.81e-02 5.00e-03 −1.88 1.23 −1.03 **
ULBP3 UL16 binding protein 3 79465 5.51e-02 3.20e-04 1.21e-01 1.30 1.50 1.12 * **
ULK1 unc-51-like kinase 1 (C. elegans) 8408 8.48e-02 4.11e-01 2.45e-03 −1.44 1.33 1.27 ** *
USP38 ubiquitin specific peptidase 38 84640 8.54e-03 1.46e-04 4.15e-01 1.53 1.34 1.27 ** * *
VAMP1 vesicle-associated membrane protein 1 (synaptobrevin 1) 6843 1.08e-03 3.77e-05 4.65e-01 1.49 1.48 1.28 ** ** *
VLDLR very low density lipoprotein receptor 7436 4.04e-02 4.49e-04 2.18e-03 −1.05 −1.08 −1.61 **
ZC3H7B zinc finger CCCH-type containing 7B 23264 6.99e-02 4.01e-04 8.97e-01 −1.39 −1.30 −1.32 **
ZC3HAV1 zinc finger CCCH-type, antiviral 1 56829 4.54e-02 3.89e-03 2.25e-01 1.74 1.29 1.17 **
ZCCHC14 zinc finger, CCHC domain containing 14 23174 3.05e-02 1.36e-03 9.05e-02 1.11 1.66 1.27 **
ZNF253 zinc finger protein 253 56242 5.52e-02 2.43e-02 1.07e-01 2.18 1.16 1.11 **
ZNF426 zinc finger protein 426 79088 6.98e-02 3.42e-03 7.62e-01 1.55 1.51 1.30 * *
ZNF48 zinc finger protein 48 197407 5.05e-02 5.04e-03 1.14e-02 −1.67 −1.07 −1.03 **
ZNF487P zinc finger protein 487, pseudogene 642819 5.33e-05 1.01e-03 5.62e-02 1.47 2.43 1.18 **
ZNF724P zinc finger protein 724, pseudogene 440519 3.69e-02 1.45e-01 1.73e-02 2.07 −1.05 −1.15 **
ZNF737 zinc finger protein 737 100129842 2.08e-02 6.03e-03 3.48e-01 2.11 1.29 1.46 **
ZSWIM6 zinc finger, SWIM-type containing 6 57688 4.63e-02 5.34e-03 4.44e-01 1.55 1.78 1.22 *

P-values in bold if significant at two-factor ANOVA (<0.05).

FDR: false discovery rate, according to BETR analysis. Ptreatment: P-value for treatment effect; and Pinteraction: P-value for interaction effect, at two-factor ANOVA. FC: fold-change in Aminaphtone-treated vs. untreated IL-1β-stimulated endothelial cells. AMNA: Aminaphtone. Pairwise: pairwise significant at two-tailed t-test.

*

P<0.05.

**

P<0.01 at two-tailed t-test.