Table 2. Strain identity of 14 isolates associated with crown gall.
| Isolate name | Host | Positive ID based on | # high quality read pairs | Clade (based on 16S rDNA) | # of virulence genes ID’ed |
|---|---|---|---|---|---|
| 13-2099-1-2 | Quaking Aspen | virD2 PCR | 1,244,074 | Agrobacterium | 63 |
| 13-626 | Pear | virD2 PCR | 220,903 | Agrobacterium | 2 (nocM, nocP) |
| AC27/96 | Pieris | Not pathogenic | 826,690 | Rhizobium | 1 (tssD) |
| AC44/96 | Pieris | No reaction to hybridization probes | 1,404,002 | Rhizobium | 0 |
| B131/95 | Peach/Almond Rootstock | Pathogenicity assay | 539,283 | Agrobacterium | 46 |
| B133/95 | Peach/Almond Rootstock | Pathogenicity assay | 1,199,902 | Agrobacterium | 46 |
| B140/95 | Peach/Almond Rootstock | Response to 20 different biochemical and physiological tests | 448,314 | A. tumefaciens | 51 |
| N2/73 | Cranberry gall | Response to 20 different biochemical and physiological tests | 1,345,404 | A. tumefaciens | 64 |
| W2/73 | Euonymus | Response to 20 different biochemical and physiological tests | 1,244,159 | A. rubi | 51 |
| 15-1187-1-2a | Yarrow | virD2 PCR | 508,223 | A. tumefaciens | 39 |
| 15-1187-1-2b | Yarrow | virD2 PCR | 299,970 | A. tumefaciens | 38 |
| 14-2641 | Rose | No data | 698,756 | Serratia | 0 |
| 15-172 | Leucanthemum | Colony morphology on selective media | 384,308 | A. tumefaciens | 56 |
| 15-174 | Leucanthemum | Colony morphology on selective media | 753,570 | A. tumefaciens | 58 |