| “Agro-type” tool (Agrobacterium) |
| MLSA (dnaK, glnA, gyrB, recA, rpoB, thrA, truA) |
Rhizobiaceae |
199 |
Pérez-Yépez et al. (2014) |
| MLSA (atpD, gapA, gyrB, recA, rplB) |
Rhizobiaceae |
188 |
Alexandre et al. (2008) |
| dnaJ |
Rhizobiaceae |
198 |
Alexandre et al. (2008) |
| 16S rDNA |
Rhizobiaceae |
245 |
|
| “Rhodo-type” tool (Rhodococcus) |
| MLSA (ftsY, infB, rpoB, rsmA, secY, tsaD, ychF) |
Rhodococcus |
85 |
Adékambi et al. (2011) |
| 16S rDNA |
Rhodococcus |
66 |
|
| “Panto-type” tool (Pantoea agglomerans) |
| MLSA (fusA, gyrB, leuS, pyrG, rplB, rpoB) |
Pantoea, Erwinia
|
356 |
Delétoile et al. (2009) |
| 16S rDNA |
Pantoea, Erwinia
|
352 |
|
| “Pseudo-type” tool (Pseudomonas savastanoi) |
| MLSA (gapA, gltA, gyrB, rpoD) |
Pseudomonas syringae |
158 |
Hwang et al. (2005) |
| MLSA (acnB, fruK, gapA, gltA, gyrB, pgi, rpoD) |
Pseudomonas syringae |
153 |
Sarkar & Guttman (2004) |
| 16S rDNA |
Pseudomonas syringae |
161 |
|
| “Phytopath-type” tool |
| 16S rDNA |
Rhodococcus, Agrobacterium, Pseudomonas syringae, Ralstonia, Xanthomonas, Pantoea, Erwinia, Xylella, Dickeya, Pectobacterium, Clavibacter, Rathayibacter
|
345 |
|
| MLSA (atpD, dnaK, gyrB, ppK, recA, rpoB) |
Clavibacter |
7 |
Jacques et al. (2012) |
| MLSA (dnaA, gyrB, kdpA, ligA, sdhA) |
Clavibacter |
7 |
Tancos, Lange & Smart (2015) |
| MLSA (dnaA, dnaJ, dnaX, gyrB, recN) |
Dickeya |
40 |
Marrero et al. (2013) |
| MLSA (acnA, gapA, icdA, mdh, pgi) |
Pectobacterium |
54 |
Kim et al. (2009) |
| MLSA (adk, egl, fliC, gapA, gdhA, gyrB, hrpB, ppsA) |
Ralstonia |
28 |
Castillo & Greenberg (2007) |
| MLSA (dnaK, fyuA, gyrB, rpoD) |
Xanthomonas |
348 |
Young et al. (2008) |
| MLSA (acvB, copB, cvaC, fimA, gaa, pglA, pilA, rpfF, xadA) |
Xylella |
17 |
Parker, Havird & De La Fuente (2012) |
