TABLE 2.
Single nucleotide variants among the 206 LA-MRSA isolatesa
Mutation | SNV | ncSNV |
sSNV |
nsSNV |
msSNV |
||||
---|---|---|---|---|---|---|---|---|---|
No. | % | No. | % | No. | % | No. | % | ||
Transition | A↔G | 521 | 31.2 | 631 | 35.7 | 958 | 32.8 | 31 | 29.8 |
C↔T | 570 | 34.2 | 743 | 42.0 | 983 | 33.7 | 30 | 28.8 | |
Transversion | A↔T | 200 | 12.0 | 182 | 10.3 | 251 | 8.6 | 18 | 17.3 |
A↔C | 145 | 8.7 | 96 | 5.4 | 299 | 10.2 | 10 | 9.6 | |
G↔T | 174 | 10.4 | 92 | 5.2 | 291 | 10.0 | 15 | 14.4 | |
G↔C | 59 | 3.5 | 24 | 1.4 | 138 | 4.7 | 0 | 0.0 | |
All SNVs | 1,669 | 1,768 | 2,920 | 104 |
nc, noncoding; s, silent; ns, nonsilent; ms, missense.