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. 2016 May 16;82(11):3348–3356. doi: 10.1128/AEM.03982-15

TABLE 1.

Indicator species analyses

OTU and associationa Probabilityb
Indicator value index P
A B
OTUs associated with habitat
    Rhizosphere soil
        Fu1 1.000 0.778 0.882 0.001
        Cl1 0.708 0.945 0.818 0.003
        G17 1.000 0.556 0.745 0.001
        Fu5 1.000 0.500 0.707 0.002
        P4 1.000 0.389 0.624 0.006
        Cl4 1.000 0.333 0.577 0.022
        Ar2 1.000 0.278 0.527 0.045
    Roots
        Rh1 0.833 0.833 0.833 0.001
        G6 0.929 0.722 0.819 0.001
        Rh2 0.621 1.000 0.788 0.004
        Scu1 0.733 0.611 0.669 0.047
OTUs associated with soil types
    THP
        G18 1.000 1.000 1.000 0.001
        G19 1.000 1.000 1.000 0.001
        G1 1.000 0.667 0.816 0.003
        Fu4 1.000 0.500 0.707 0.017
        Amb1 1.000 0.500 0.707 0.008
    THA
        G16 1.000 0.500 0.707 0.016
        Sc1 1.000 0.500 0.707 0.016
        Ac1 1.000 0.500 0.707 0.016
        G12 0.429 1.000 0.655 0.009
    LHP
        D2 1.000 0.500 0.707 0.018
    TOR
        Fu2 1.000 0.500 0.707 0.016
    XER
        G11 1.000 0.667 0.816 0.001
        G20 0.3529 1.000 0.594 0.038
    THS
        G14 1.000 0.500 0.707 0.012
a

Soil types were as follows: THS, Typic Haplosalid; XER, Lithic Xerorthent; TOR, Xeric Torriorthent; THA, Typic Haplargid; LHP, Lithic Haploxeroll; THP, Typic Haploxeroll.

b

Probability A, the probability that the surveyed site belongs to a given environment, given the fact that the species has been found; probability B, the probability of finding the species in sites belonging to a given environment.