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. 2016 Jul 26;7:1113. doi: 10.3389/fmicb.2016.01113

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Copyright © 2016 Boedi, Berger, Sieber, Münsterkötter, Maloku, Warth, Sulyok, Lemmens, Schuhmacher, Güldener and Strauss.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

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(A) Frequency distribution of genes counts showing certain log2(FPKM) values under the different growth conditions. (B) Venn diagram showing distribution of 65% highest expressed genes within the different growth conditions. Considering the proportion of 65% of highest expressed genes (8987 genes out of 13826 annotated) results in a log2(FPKM) threshold of 1.99 under pathogenic (patho), 2.46 under saprophytic (sapro), and 1.92 under axenic (axo) growth conditions.