Figure - PMC

Skip to main content

An official website of the United States government

Here's how you know

Here's how you know

Official websites use .gov
A .gov website belongs to an official government organization in the United States.

Secure .gov websites use HTTPS
A lock ( ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.

View full-text article in PMC

. 2016 Jul 25;9:23. doi: 10.1186/s13040-016-0102-8

Search in PMC
Search in PubMed
View in NLM Catalog
Add to search

© The Author(s). 2016

Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

PMC Copyright notice

Fig. 2 — The Data Model: Schematic representation of biological information on proteins, pathways, tissues, disease and drugs, and the names of the GEO data sources, (GEO Study id, GSM sample type comparison), represented by nodes in the graph database. Relationships between these entities are shown by edges and refer to associations between: a) protein-tissue, (TISSUEENHANCED); b) protein-pathway (IN PATHWAY); c) protein-disease (BIOMARKER, GENETIC VARIATION, THERAPEUTIC, KANEKO ASSOCIATION); d) protein-drug (DRUG TARGET, DRUG ENZYME, DRUG CARRIER, DRUG TRANSPORTER), e) protein-protein (PPI ASSOCIATION, PPI COLOCALIZATION, PPI GENETIC INTERACTION, SEQ SIM); f) protein-GEO Comparison (DEG RELATED TO) and g) GEO Comparison-GEO Study (PART OF)