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. 2016 Jul 5;113(29):E4248–E4256. doi: 10.1073/pnas.1607851113

Fig. 2.

Fig. 2.

Characterization of methylation interactions in DMRs. (A) Methylation levels of TCM DMRs and TCdM DMRs are shown. The high parent is the parent with a higher methylation level at the DMR. The low parent is the parent with a lower methylation level at the DMR. (B) Allele-specific analysis of methylation levels of TCM DMRs and TCdM DMRs. The high allele is the allele from the high parent. The low allele is the allele from the low parent. DNA methylation levels of a TCM DMR (C) and a TCdM DMR (D) (boxed regions) in Col, C24, F1 hybrids, nrpd1nrpe1 (Col), nrpd1nrpe1 (C24), and nrpd1nrpe1 F1 hybrids. Integrative Genomics Viewer (IGV) screen shots of whole-genome bisulfite sequencing data are shown. Vertical bars on each track indicate DNA methylation levels. (Bottom) Levels of DNA methylation and siRNAs of boxed regions were quantified from the whole-genome data and are shown. F1 and F1r indicate where the maternal line is Col and C24, respectively. Chr, Chromosome.