Table 3. Comparison of substitution rates per site of RABVs.
References | Number of sequences | Whole genome | Substitution per site (95% HPD) | Comment | ||||
---|---|---|---|---|---|---|---|---|
N -gene | P—gene | M- gene | G—gene | L—gene | ||||
This study | 55 | 2.5 | 3.1 E-4 | 6.0 E-4 | 4.4 E-4 | 3.3 E-4 | 2.4 E-4 | Whole genome sequences of this study (Greenland only) |
(2.1 E-4–3.0 E-4) | (1.8 E-4–4.4 E-4) | (4.2 E-4–7.9 E-4) | (2.7 E-4–6.4 E-4) | (2.2–4.5 E-4) | (1.9–2.9 E-4) | |||
79 | 2.2 E-4 | Whole genome sequences of this study | ||||||
(2.0 E-4–2.5 E-4) | ||||||||
109 | 2.5 E-4 | N gene sequences (Fig 2) | ||||||
(1.9 E-4–3.1 E-4) | ||||||||
[17] | 32 | 1.23 E-4 | Arctic/Arctic-like RABV | |||||
(6.8 E-5–1.83 E-4) | ||||||||
17 | 3.89 E-4 | European red fox | ||||||
(5.1 E-5–6.7 E-4) | ||||||||
60 | 1.48 E-4 | Combination of arctic/arctic-like, European red fox and 11 further isolates | ||||||
(8.1 E-5–2.23 E-4) | ||||||||
[64] | 76 | 4.6 E-4 | Chinese street RABV | |||||
(2.5 E-4–6.6 E-4) | ||||||||
[65] | N = 151 | 2.3 E-4 | 3.9 E-4 | Global genetic diversity of RABV for which the time(year) of sampling was available | ||||
G = 74 | (1.1 E-4–3.6 E-4) | (1.2 E-4–6.5 E-4) | ||||||
[20] | 67 | 3.8 E-4 | Arctic—related RABV | |||||
(2.3 E-4–5.4 E-4) | ||||||||
[66] | N = 80 | 5.27 E-4 | 4.1 E-4 | N = 1350 bp | ||||
G = 71 | (± 0.23 E-4) | (± 0.3 E-4) | G = 690 bp | |||||
[18] | 212 | 3.817 E-4 | Arctic RABV | |||||
(2.816 E-4–4.825 E-4) | N = 500 bp |