Table 2. List of DEGs that impeded petal development in line APL01.
| Gene id | Arabidopsis homologue | Gene name | Function description | Function | Log2FoldChange | padj |
|---|---|---|---|---|---|---|
| BnaA06g14090D | AT5G62000 | ARF2 | transcription factor | Repressor | +∞ | 2.76E-64 |
| BnaA05g14370D | AT5G62000 | ARF2 | transcription factor | Repressor | 10.293 | 2.34E-59 |
| BnaA07g25390D | AT2G33860 | ARF3 | transcription factor | Repressor | 0.80589 | 0.022004 |
| BnaAnng29380D | AT5G02030 | PNY | transcription factor | Activator | −0.87659 | 0.013344 |
| BnaA10g13520D | AT5G60690 | IFL | transcription factor | Activator | −0.91016 | 0.010943 |
| BnaCnng73930D | AT5G57390 | AIL5 | transcription factor | Activator | −0.91498 | 0.041957 |
| BnaA10g18480D | AT5G15800 | SEP1 | transcription factor | Activator | −1.0138 | 0.0029356 |
| BnaA07g38010D | AT2G45190 | FIL | transcription factor | Activator | −1.4698 | 1.80E-05 |
| BnaC05g10940D | AT1G14760 | KNATM | transcription factor | Activator | −1.4822 | 0.036086 |
| BnaC07g11300D | AT1G24260 | SEP3 | transcription factor | Activator | −1.725 | 0.003165 |
| BnaC03g01370D | AT5G03680 | PTL | transcription factor | Activator | −2.0615 | 3.63E-05 |
| BnaA06g09570D | AT1G14760 | KNATM | transcription factor | Activator | −2.846 | 0.0053783 |
| BnaC01g36350D | AT3G15170 | CUC1 | transcription factor | Activator | −2.9968 | 0.0034186 |
| BnaC09g49350D | AT5G06070 | RBE | transcription factor | Activator | −4.4325 | 0.017223 |
| BnaC03g00520D | AT5G02030 | PNY | transcription factor | Activator | −∞ | 6.93E-05 |
| BnaC05g48320D | AT3G02310 | SEP2 | transcription factor | Activator | −∞ | 1.60E-83 |
| BnaA10g11890D | AT5G37055 | SEF | epigenetic regulation | Repressor | 6.9775 | 1.03E-21 |
| BnaA03g03410D | AT5G11530 | EMF1 | epigenetic regulation | Repressor | 2.6625 | 1.47E-14 |
| BnaA03g09860D | AT5G58230 | MSI1 | epigenetic regulation | Repressor | 2.2538 | 1.68E-13 |
| BnaCnng01170D | AT4G02020 | SWN | epigenetic regulation | Repressor | 1.6771 | 0.00094501 |
| BnaAnng03220D | AT3G06400 | CHR11 | epigenetic regulation | Repressor | 1.6757 | 5.85E-08 |
| BnaA08g00100D | AT3G33520 | ARP6 | epigenetic regulation | Repressor | 0.98694 | 0.0049042 |
| BnaA06g16550D | AT3G48430 | JMJ12 | epigenetic regulation | Activator | −1.0094 | 0.015536 |
| BnaC02g13170D | AT5G55300 | TOP1ALPHA | epigenetic regulation | Activator | −1.5772 | 1.41E-05 |
| BnaA10g14620D | AT5G20930 | TSL | epigenetic regulation | Activator | −1.9186 | 3.60E-09 |
| BnaC09g21160D | AT2G03070 | MED8 | transcriptional co-activator | Activator | −1.2735 | 0.00034295 |
| BnaA02g12180D | AT1G65620 | AS2 | transcriptional repressor | Activator | −1.3106 | 0.027009 |
| BnaA07g19900D | AT1G15750 | TPL | transcriptional repressor | Repressor | 1.5076 | 1.48E-06 |
| BnaC04g12390D | AT2G32410 | AXL1 | protein ubiquitination | Activator | −0.84903 | 0.048187 |
| BnaA07g32230D | AT5G42190 | ASK2 | protein ubiquitination | Activator | −1.031 | 0.044645 |
| BnaC05g15660D | AT2G25700 | ASK3 | protein ubiquitination | Activator | −1.0949 | 0.023784 |
| BnaA09g50410D | AT1G05180 | AXR1 | protein ubiquitination | Activator | −1.3034 | 0.0061456 |
| BnaA02g17620D | AT1G75950 | ASK1 | protein ubiquitination | Activator | −1.6267 | 3.00E-07 |
| BnaC08g09370D | AT1G30950 | UFO | protein ubiquitination | Activator | −2.0059 | 8.83E-05 |
| BnaA04g10140D | AT5G40280 | WIG | protein farnesylation | Repressor | 0.99166 | 0.010723 |
| BnaA01g18430D | AT3G59380 | PLP | protein farnesylation | Repressor | 0.81325 | 0.026371 |
“Activator” indicates that gene positively regulates petal development.
“Repressor” indicates that gene negatively regulates petal development.
“+∞” indicates that gene is only expressed in line APL01.
“−∞” indicates that gene is only expressed in line PL01.