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. 2016 Jul 27;11(7):e0159864. doi: 10.1371/journal.pone.0159864

Table 3. Epinephelus marginatus genetic population diversity indices within Malta’s Fisheries Management Zone.

Locus
GAG045 GAG038 GAG010 RHCA002 RHCA008 RHCA001 EM10 GAG049 GAG007 SC06 D076 RHCA007 RHCA004 RHCA003 Mean all loci
Malta
 A 17 14 14 8 16 11 12 8 3 13 12 7 7 2 10.29
 R 67–125 71–123 103–159 124–138 203–251 382–416 84–134 87–125 140–144 189–227 353–401 316–328 212–228 347–353 -
 S 97 75 119 134 213 386 88 87 144 205 381 322 218 347 -
 F 0.38 0.36 0.26 0.24 0.24 0.34 0.20 0.48 0.54 0.24 0.24 0.30 0.24 0.98 0.36
 HE 0.818 0.838 0.864 0.836 0.882 0.824 0.886 0.698 0.590 0.880 0.873 0.777 0.823 0.040 0.759
 HO 0.720 0.680 0.800 0.760 0.800 0.720 0.720 0.840 0.280 0.920 0.800 0.880 0.720 0.040 0.691
 PHWE 0.521 0.034* 0.235 < 0.001* 0.001* 0.074 < 0.001* 0.145 < 0.001* 0.047* 0.594 0.041* 0.258 0.088 -
 FIS 0.048 0.117 0.105 0.175 0.045 0.1223 0.282 -0.017 0.230 0.074 0.039 0.075 0.069 0.314 -
 LD 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -
 n 83 83 83 83 83 83 83 83 83 83 83 83 83 83 83
Hurd Bank
 A 12 21 11 4 6 8 14 18 1 7 4 7 4 N/A 9.00
 R 81–105 73–115 119–141 132–140 203–215 390–406 88–116 87–123 142–144 209–223 377–393 310–324 212–220 347 -
 S 99 75 119 134 213 392 90 87 144 223 381 322 220 347 -
 F 0.33 0.33 0.75 0.33 0.58 0.50 0.25 0.33 0.58 0.25 0.42 0.75 0.67 1 0.51
 HE 0.833 0.833 0.439 0.803 0.621 0.712 0.864 0.803 0.530 0.848 0.773 0.439 0.530 N/A 0.695
 HO 1.000 1.000 0.500 0.833 0.500 1.000 0.833 0.833 0.833 1.000 0.833 0.500 0.667 N/A 0.795
 PHWE 0.054 0.054 1.000 0.041* 0.214 0.478 0.005* 0.039* 0.395 0.035* 0.087 1.000 1.000 N/A -
 FIS -0.224 -0.224 -0.154 -0.042 0.211 -0.463 0.038 -0.042 -0.667 -0.200 -0.087 -0.154 -0.290 N/A -
 LD 2 1 0 3 0 0 4 3 0 3 0 0 0 0 -
 n 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6

Number of alleles per locus (A), observed allelic size range in bp (R), size in bp of most common alleles (S), frequency of the most common allele (F), expected heterozygosity (HE), observed heterozygosity (HO), Hardy-Weinberg Equilibrium p-value (PHWE), FDR Linkage Disequilibrium (LD), samples genotyped (n) and significant p < 0.05 (*).