Table 6.
Gene sets enriched in African-American tumor samples compared to Caucasian-American tumor samples.
| Gene Set | Size | ES | NES | P-value | Q-value |
|---|---|---|---|---|---|
| KEGG: Small Cell Lung Cancer | 14 | 0.733 | 1.722 | 2.16E-02 | 1.67E-01 |
| BioCarta: Platelet-Amyloid Precursor Protein Pathway | 8 | 0.684 | 1.638 | 1.36E-02 | 1.82E-01 |
| BioCarta: Agrin Pathway | 12 | 0.503 | 1.505 | 5.63E-02 | 2.02E-01 |
| KEGG: Neuroactive Ligand-Receptor Interaction | 5 | 0.988 | 1.573 | 4.03E-03 | 2.18E-01 |
| BioCarta: Intrinsic Pathway | 12 | 0.619 | 1.537 | 4.70E-02 | 2.36E-01 |
Size = total number of genes in pathway, ES = enrichment score, NES = normalized enrichment score, P-value = probability of significance after permutation, Q-value = false discovery rate-adjusted P-value.