. 2016 Jul 1;17(7):1058. doi: 10.3390/ijms17071058

Table 2.

Differentially expressed unigenes with significantly enriched pathways.

Pathway	DEGs with Pathway Annotation		All genes with Pathway Annotation		p-Value		Pathway ID
Pathway	May 2013	May 2014	May 2013	May 2014	May 2013	May 2014	Pathway ID
Plant-pathogen interaction	13	17	111	113	8.55 × 10⁻⁵	5.04 × 10⁻⁵	ko04626
Plant-pathogen interaction	(9.35%)	(8.85%)	(2.73%)	(3.04%)	8.55 × 10⁻⁵	5.04 × 10⁻⁵	ko04626
Protein processing in endoplasmic reticulum	16	4	231	186	5.03 × 10⁻³	9.89 × 10⁻¹	ko04141
Protein processing in endoplasmic reticulum	(11.51%)	(2.08%)	(5.69%)	(5%)	5.03 × 10⁻³	9.89 × 10⁻¹	ko04141
Oxidative phosphorylation	13	15	171	161	5.24 × 10⁻³	1.76 × 10⁻²	ko00190
Oxidative phosphorylation	(9.35%)	(7.81%)	(4.21%)	(4.33%)	5.24 × 10⁻³	1.76 × 10⁻²	ko00190
Starch and sucrose metabolism	13	15	173	152	5.77 × 10⁻³	1.08 × 10⁻²	ko00500
Starch and sucrose metabolism	(9.35%)	(7.81%)	(4.26%)	(4.08%)	5.77 × 10⁻³	1.08 × 10⁻²	ko00500
Plant hormone signal transduction	8	15	173	152	2.40 × 10⁻¹	1.08 × 10⁻²	ko04075
Plant hormone signal transduction	(5.76%)	(7.81%)	(4.26%)	(4.08%)	2.40 × 10⁻¹	1.08 × 10⁻²	ko04075
Glycerophospholipid metabolism	5	10	84	90	1.59 × 10⁻¹	1.64 × 10⁻²	ko00564
Glycerophospholipid metabolism	(3.6%)	(5.21%)	(2.07%)	(2.42%)	1.59 × 10⁻¹	1.64 × 10⁻²	ko00564

DEGs with pathway annotation: Figures in brackets represent the ratio of the number of DEGs that are annotated to this pathway and the number of DEGs that are annotated to all pathways. All genes with pathway annotation: Figures in brackets represent the ratio of all genes that are annotated to this pathway and all genes that are annotated to all pathways.