Table 1.
All NCBI open reading frame (ORF) finder sequence matches for Tpl94D in the original 12 sequenced Drosophila species
| GI Number |
||||
|---|---|---|---|---|
| Drosophila Species | Match Number | Gene Locus | Whole Nucleotide and Transcript Sequences | Protein Sequence |
| D. melanogaster‡,# | Control (Tpl94D) | CG31281 | 24649165 | 24649166 |
| D. simulans*,‡,# | 1–2 | GD20990 | 195573025 | 195573026 |
| D. simulans† | 2–2 | GD21472 | 195574870 | 195574871 |
| D. sechellia*,# | 1–2 | GM26474 | 195331176 | 195331177 |
| D. sechellia† | 2–2 | GM12829 | 195341320 | 195341321 |
| D. yakuba*,‡,# | 1–2 | GE10340 | 195502744 | 195502745 |
| D. yakuba† | 2–2 | GE23890 | 195503141 | 195503142 |
| D. erecta*,# | 1–2 | GG11172 | 194910675 | 194910676 |
| D. erecta† | 2–2 | GG24235 | 194857282 | 194857283 |
| D. ananassae*,‡,# | 1–3 | GF19889 | 194743971 | 194743972 |
| D. ananassae† | 2–3 | GF20096 | 194746963 | 194746964 |
| D. ananassae† | 3–3 | GF15002 | 194758514 | 194758515 |
| D. pseudoobscura*,‡,# | 1–1 | GA22645 | 198471329 | 198471330 |
| D. persmilis† | 1–1 | GL26871 | 195168587 | 195168588 |
| D. willistoni† | 1–2 | GK14607 | 195435142 | 195435143 |
| D. willistoni† | 2–2 | GK12423 | 195461023 | 195461024 |
| D. mojavensis♦ | ‐ | ‐ | ‐ | ‐ |
| D. virilis† | 1–1 | GJ16066 | 195385648 | 195385649 |
| D. grimshawi♦ | ‐ | ‐ | ‐ | ‐ |
*
Denotes better than threshold
†
Denotes worse than threshold
‡
Denotes verified through RNA-Seq analysis
♦
Denotes no matches found for D. mojavensis and D. grimshawi
#
Denotes identified orthologs for Tpl94D
The cut off threshold was query coverage of 40% with maximum identity score of 36 and an E-value of 7 × 10−5