Skip to main content
. 2016 Apr 27;5(3):e1178518. doi: 10.1080/21565562.2016.1178518

Table 2.

Best NCBI nucleotide BLAST sequence matches and orthologs for Tpl94D (GI: 24649165)

      Genomic DNA Sequence
Transcript Sequence
Species Name Gene Locus GI Number Maximum Identity (%) Query Coverage (%) E- Value Score Maximum Identity (%) Query Coverage (%) E- Value Score
D. simulans***# GD20990 195573025 86 36 0 86 33 1e-170
D. sechellia***# GM26474 195331176 86 36 0 86 33 7e-168
D. yakuba***# GE10340 195502744 69 35 1e-82 69 32 1e-69
D. erecta***# GG11172 194910675 67 34 2e-61 71 31 9e-78
D. simulans GD21472 195574870 100 0 0.11
D. sechellia GM12829 195341320 100 0 0.11
D. yakuba, GE23890 195503141
D. erecta, GG24235 194857282
D. ananassae*,# GF22417 194766791 86 2 4e-07 86 2 3e-07
D. ananassae GF19889 194743971 100 0 0.38 100 0 0.32
D. ananassae, GF20096 194746963
D. ananassae GF15002 194758514 100 7 0.031 100 0 0.32
D. pseudoobscura*,# GA22363 198467493 93 4 3e-08 93 5 3e-08
D. pseudoobscura, GA22645 198471329
D. persmilis* GL18087 195175349 93 1 1e-07 93 1 1e-07
D. persmilis, GL26871 195168587
D. willistoni* GK19855 195432301 85 6 1e-06 85 3 1e-06
D. willistoni, GK14607 195435142
D. willistoni, GK12423 195461023
D. mojavensis* GI13566 195128228 92 3 2e-05 92 2 1e-05
D. virilis* GJ22187 195383563 100 5 1e-06 85 3 1e-06
D. virilis GJ16066 195385648 100 0 0.38
D. grimshawi* GH21505 195027639 83 2 1e-05
*

*Denotes best matches for Drosophila species within the Drosophila melanogaster species subgroup and greater than threshold for NCBI Open Reading Frame Finder

*

Denotes best match for nucleotide sequence of Tpl94D for Drosophila species outside the Drosophila melanogaster species subgroup

Denotes NCBI Open Reading Frame Finder Match and match not found based on transcript sequence of Tpl94D

#

Denotes identified orthologs for Tpl94D

No match based on Tpl94D's genomic and transcript sequences