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. 2016 Jul 28;5:F1000 Faculty Rev-1882. [Version 1] doi: 10.12688/f1000research.8829.1

Table 2. An alphabetical list of dysregulation of genes and signaling pathways seen in the cutaneous T cell lymphomas.

AT-rich interactive domain-containing protein 1A (ARID1A) 23
B-Raf proto-oncogene, serine/threonine kinase (BRAF) 24
Bromodomain-9 (BRD-9) 24
Cancer testis (CT) 2
Caspase recruitment domain (CARD11) 23, 24
C-C chemokine receptor-4 (CCR-4) 23
Chromodomain-helicase-DNA-binding protein (CHD)-3 24
CREB-binding protein (CREBBP) 24
Cyclin-dependent kinase-2 (CDKN-2) 2326
Cyclooxygenase-2 (COX-2) 25
Dynamin-3 (DNM-3) 22
Embryonic stem cell regulators 3, 25
Eph receptor A4 (EPHA4) 13
Forkhead box P3 (FOXP3) 27
GATA-binding protein-3 (GATA-3) 22, 25
Histone deacetylase-6 (HDAC-6) 25
Histone-lysine N-methyltransferase (KMT)-2D or myeloid/lymphoid or mixed-lineage leukemia protein-2 (MLL-2) 24
Interleukin-2 receptor common gamma chain (IL-2Rgc) 3, 25
Janus kinase-3 (Jak-3)/signal transducers and activators of transcription (STAT) 25, 28
KIRD3DL2 22
Lysine (K)-specific methyltransferase (KMT)-2C or myeloid/lymphoid or mixed-lineage leukemia protein-3 (MLL-3) 24
MYC-associated factor X (MAX) 25
Metallothioneins I and II (MTI/II) 29
Methylthioadenosine-phosphorylase (MTAP) 30
Mitogen-activated protein kinase 1 (MAPK1) 24
MYC-binding protein (MYCBP) 25
NOTCH1 13, 31
Nuclear factor kappa-light-chain-enhancer of activated B cells (NFκB) 3, 24, 25
Nuclear factor of activated T cells (NFAT) 24
Phospholipase C gamma 1 (PLCG1) 23, 32
P21 33
P53 28, 32
Phosphatase and tensin homolog (PTEN) 24, 25, 34
Plastin-3 (PLS-3) 22
Protein kinase, CGMP-dependent (PRKG1) 24
Receptor tyrosine kinase (RTK) 13
Retinoblastoma-1 (RB-1) 24
Ribosomal protein S6 kinase-1 (RPS6KA-1) 23
Runt-related transcription factor-3 (RUNX-3) 22
Src homology region 2 domain-containing phosphatase-1 (SHP1) 25
Special AT-rich sequence-binding protein 1 (SATB1) 29
SRC proto-oncogene, non-receptor tyrosine kinase (Src kinases) 25
Suppressors of cytokine signaling-3 (SOCS3) 25
SWI/SNF-related, matrix-associated, actin-dependent regulator of chromatin-A4 (SMARC-A4) 24
Tet methylcytosine dioxygenase 2 (TET2) 24
Thymocyte selection-associated high-mobility group box (TOX) 22, 25
Tumor protein p53 (TP53) 23, 24
Tumor necrosis factor receptor superfamily-1B (TNFRSF-1B) 30
Twist 22
Zinc finger E-box-binding homeobox 1 (ZEB1) 23