Table 2.
Rotavirus genotype | No. of strains | Median qRT-PCR Ct-value, (IQR) | Luminex GPP positive, n = (%) |
---|---|---|---|
G1[P8] | 25 | 20.3 (19.3–22.8) | 25 (100) |
G2[P4] | 17 | 21 (19.3–22.6) | 17 (100) |
G2[P6] | 12 | 20.4 (18.8–21.9) | 12 (100) |
G2[P-UDa] | 7 | 25.1 (21.7–27.2) | 7 (100) |
G3[P6] | 3 | 22.1 (20–23.1) | 3 (100) |
Total | 64 | 21 (19.6–23.3) | 64 (100) |
Abbreviations: IQR interquartile range; Ct cycle threshold, GPP gastrointestinal pathogens
a UD, undetermined